Return to main results Retrieve Phyre Job Id

Job DescriptionP10408
Confidence97.26%DateThu Jan 5 11:32:13 GMT 2012
Rank136Aligned Residues108
% Identity19%Templatec2w00B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hsdr; PDBTitle: crystal structure of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110.........120..... ....130.........140.........150.........160.........170...
Predicted Secondary structure 











..













Query SS confidence 





























. .















































Query Sequence  ERCIAEMRTGEGKTLTATLPAYLNALTGKG. . VHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAAD
Query Conservation   
 



 










 
 



 
 
..










 

 
 
  

  





 
       


  
  
Alig confidence 





























..









...


































Template Conservation    
 









 
    
  
        

 
 

  
...  
    
                
   
      
Template Sequence  SGGYIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDL. . . DYQTXKEYQRFSPDSVNGSENTAGLKRNLDKDDNK
Template Known Secondary structure  GS
TTSSTT
TT


GGG
...
TTSTT
SSSS



SS

Template Predicted Secondary structure 












...















Template SS confidence 















































































   301........310.........320.........330.........340.. .......350.........360.........370.......
 
   174.....180.........190.........200.........210.
Predicted Secondary structure 











Query SS confidence 





































Query Sequence  ITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEV
Query Conservation 





 
 








       


    





Alig confidence 










.....





















Template Conservation 








  .....                





Template Sequence  IIVTTIQKLNN. . . . . LXKAESDLPVYNQQVVFIFDEC
Template Known Secondary structure  .....



GGGGSS
Template Predicted Secondary structure  .....












Template SS confidence 





































   378.380........ .390.........400.........410
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions