Job Description P10408 Confidence 85.19% Date Thu Jan 5 11:32:13 GMT 2012 Rank 170 Aligned Residues 148 % Identity 15% Template c2o0hA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dna packaging protein gp17; PDBTitle: t4 gp17 atpase domain mutant complexed with atp Resolution 1.88 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.
Predicted Secondary structure																																												.	.																														.	.
Query SS confidence																																												.	.																														.	.
Query Sequence		M	R	H	F	D	V	Q	L	L	G	G	M	V	L	N	E	R	C	I	A	E	M	R	T	G	E	G	K	T	L	T	A	T	L	P	A	Y	L	N	A	L	T	.	.	G	K	G	V	H	V	V	T	V	N	D	Y	L	A	Q	R	D	A	E	N	N	R	P	L	F	E	F	L	G	.	.	L	T	V	G	I
Query Conservation																																												.	.																														.	.
Alig confidence																																												.	.																														.	.
Template Conservation
Template Sequence		L	R	D	Y	Q	R	D	M	L	K	I	M	S	S	K	R	M	T	V	C	N	L	S	R	Q	L	G	K	T	T	V	V	A	I	F	L	A	H	F	V	C	F	N	K	D	K	A	V	G	I	L	A	H	K	G	S	M	S	A	E	V	L	D	R	T	K	Q	A	I	E	L	L	P	D	F	L	Q	P	G	I
Template Known Secondary structure																S	S								S	S	S																S	S	S	S								S	S																	T	S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210														.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	P	G	M	P	A	P	A	K	R	E	A	Y	A	A	D	I	T	Y	G	T	N	N	E	Y	G	F	D	Y	L	R	D	N	M	A	F	S	P	E	E	R	V	Q	R	K	L	H	Y	A	L	V	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	S	I	L	I	D	E	A	R	T	P	L
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence		V	E	W	N	K	G	.	.	.	.	.	.	.	.	.	.	S	I	E	L	D	N	G	S	S	I	G	A	.	.	.	.	.	.	Y	A	S	S	P	D	A	V	R	G	N	S	F	A	M	I	Y	I	E	D	C	A	F	I	P	N	F	H	D	S	W	L	A	I	Q	P	V	I	S	S	G	R	R	S	K	I
Template Known Secondary structure						S	S	.	.	.	.	.	.	.	.	.	.					T	T	S						.	.	.	.	.	.				S						T	S			S					S	S	G	G	G	S	T	T														S	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.											.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	S	G	P	A	E	D	S	S	E	M	Y	K	R	V	N	K	I	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	T	T	T	P	N	G	L	N	H	F	Y	D	I	W	T	A	A	V	E
Template Known Secondary structure									S	S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions