 |
Job Description | P10408 | Confidence | 26.45% | Date | Thu Jan 5 11:32:13 GMT 2012 |
Rank | 330 | Aligned Residues | 51 |
% Identity | 31% | Template | c2d3kA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:peptidyl-trna hydrolase; |
PDBTitle: structural study on project id ph1539 from pyrococcus2 horikoshii ot3
|
Resolution | 1.90 Å |
|
 |
  |   |
440 | . | . | . | . | . | . | . | . | . | 450 | . | |
. | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | |
|
|
|
. | . | . | 500 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
E | D | I | K | E | R | T | A | K | G | Q | P | . |
V | L | V | G | T | I | S | I | E | K | S | E | L | V | S | N | E | L | T | K | A | G | I | K | H | N | V | L | N | A | K | F | H | A | N | E | A | A | I | V | A | Q | A | G | Y | . |
. |
. |
. |
P | A | A | V | T | I |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |
|
|
| . |
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |   |
|
|
|
|
|
|   |
|
|   | . | . | . | . |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |
|
|
|   |   |
|
|   |
|
|
Template Sequence |   |
E | W | F | E | A | W | F | R | E | G | Q | K | K | V | V | V | K | V | E | S | E | E | E | L | F | K | L | K | A | E | A | E | K | L | G | L | P | N | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | R | D | A | G | L | T | E | I | P | P | G | T | V | T | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
| T | T |
| T | T | S |
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|