Job Description P10408 Confidence 22.13% Date Thu Jan 5 11:32:13 GMT 2012 Rank 369 Aligned Residues 119 % Identity 14% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	G	E	G	K	T	L	T	A	T	L	P	A	Y	L	N	A	L	T	G	K	G	V	H	V	V	T	V	N	D	Y	L	A	Q	R	D	A	E	N	N	R	P	L	F	E	F	L	G	L	T	V	G	I	N	L	P	G	M	P	A	P	A	K	R	E	A	Y	A	A	D	I	T	Y	G	T	N	N	E	Y
Query Conservation
Alig confidence																															.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	G	T	G	K	T	L	L	V	S	R	F	V	E	N	A	C	A	N	K	E	R	A	I	L	F	A	Y	.	.	.	.	.	E	E	S	R	A	Q	L	L	R	N	A	Y	S	W	G	M	.	.	.	.	.	.	.	.	.	D	F	E	E	M	E	R	Q	N	L	L	K	I	V	C	A	Y	P	E	S	A
Template Known Secondary structure			T	T	S	S														T	T	T								S	.	.	.	.	.	S	S											T	T	S		.	.	.	.	.	.	.	.	.								T	T	S								G	G	G	S
Template Predicted Secondary structure																															.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.						.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.										.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	D	Y	L	R	D	N	M	A	F	S	P	E	E	R	V	Q	R	K	L	H	Y	A	L	V	D	E	V	D	S	I	L	I	D	E	A	R	T	P	L	I	I	S	G	P	A	E	D	S	S	E	M	Y	K	R	V	N	K	I	I	P	H	L	I	R	Q	E
Query Conservation
Alig confidence											.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	E	D	H	L	Q	I	I	.	.	.	K	S	E	I	N	D	F	K	P	A	R	I	A	I	D	S	L	S	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	R	G	V	S	N	N	A	F	R	Q	F	V	I	G	V	T	G	Y	A	K	Q	E	E
Template Known Secondary structure											.	.	.						T	T			S											T	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S																			T	T
Template Predicted Secondary structure											.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.				.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.													.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions