Job Description P10408 Confidence 97.45% Date Thu Jan 5 11:32:13 GMT 2012 Rank 128 Aligned Residues 104 % Identity 25% Template c1cu1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:protein (protease/helicase ns3); PDBTitle: crystal structure of an enzyme complex from hepatitis c2 virus Resolution 2.50 Å

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		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	G	T	I	S	I	E	K	S	E	L	V	S	N	E	L	T	K	A	G	I	K	H	N	V	L	N	A	K	F	H	A	N	E	A	A	I	V	A	Q	A	G	Y	P	A	A	V	T	I	A	T	N	M	A	G	R	G	T	D	I	V	L	G	G	S	W	Q	A	E	V	A	A	L	E	N	P	T	A
Query Conservation
Alig confidence																																						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	I	F	C	H	S	K	K	K	C	D	E	L	A	A	K	L	S	G	L	G	I	N	A	V	A	Y	Y	R	G	L	D	V	S	V	.	.	.	.	.	I	P	T	I	G	D	V	V	V	V	A	T	D	A	L	M	T	G	Y	T	G	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S														T	T								T	T	S		G	G	G	.	.	.	.	.	S		S	S	S	S							T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1364	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.						1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.															.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	I	E	K	I	K	A	D	W	Q	V	R	H	D	A	V	L	E	A	G	G	L	H	I	I	G	T	E	R	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	R	I	D	N	Q	L	R	G	R	S	G	R	Q	G	D	A	G	S	S	R	F	Y	L	S	M	E	D
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.							.												.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																																								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	V	I	D	C	.	N	T	C	V	T	Q	T	V	D	F	S	L	D	P	T	F	T	I	E	T	T	T	V	P	Q	D	A	V	S	R	S	Q	R	R	G	R	T	G	R	.	G	R	R	G	I	Y	R	F	V	T	P	G	E	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						.													S	S	S											B									T	T	S		S	.	S	S							S					B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																																								.
Template SS confidence
																1423	.	.	.	.	.		.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.		.	.	1470	.	.	.	.	.	.	.	.	.	1480	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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