Return to main results Retrieve Phyre Job Id

Job DescriptionP75682
Confidence50.99%DateThu Jan 5 12:13:03 GMT 2012
Rank482Aligned Residues83
% Identity23%Templated1xrsa_
SCOP infoTIM beta/alpha-barrel Cobalamin (vitamin B12)-dependent enzymes D-lysine 5,6-aminomutase alpha subunit, KamD
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100......... 110.. .......
Predicted Secondary structure 















..........


........



Query SS confidence 



















































. . . . . . . . . .


. . . . . . . .






Query Sequence  AEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVIN. . . . . . . . . . PYY. . . . . . . . WKVSEAN
Query Conservation    

  
     
       

 

   

   
  
  
   
 
 
 
 
..........
  ........   
   
Alig confidence 












..




































..........


........






Template Conservation 
  
       
 .. 
 
 

 




 
 


 

 


  


 












 





 

 


 




Template Sequence  RSIRESRFEEYGD. . KSGPLLYVIVATGNIYEDITQAVAAAKQGADVIAVIRTTGQSLLDYVPYGATTEGFGGTYATQEN
Template Known Secondary structure 

..
SS


S
TT
S


TTGGG
SS


S

S

TTS



Template Predicted Secondary structure 


..




























Template SS confidence 















































































   135....140....... ..150.........160.........170.........180.........190.........200.........210..
 
   120.........130.........140..
Predicted Secondary structure  ...






Query SS confidence  . . .






















Query Sequence  . . . LIRYFEQVADSVTLPVMLYNFPA
Query Conservation  ...
      

     

 


 
 
Alig confidence  ...






















Template Conservation 

 

 


    





 
 

 
Template Sequence  FRLMREALDKVGAEVGKYIRLCNYCS
Template Known Secondary structure  TS



Template Predicted Secondary structure 



Template SS confidence 

























   213......220.........230........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions