Job Description P75682 Confidence 95.37% Date Thu Jan 5 12:13:03 GMT 2012 Rank 107 Aligned Residues 175 % Identity 11% Template c3sqsA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing protein from dinoroseobacter shibae dfl 12 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																								.																																			.
Query SS confidence																								.																																			.
Query Sequence		D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	.	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	.	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A
Query Conservation																								.																																			.
Alig confidence																								.																																			.
Template Conservation
Template Sequence		S	I	P	A	M	Q	A	E	A	E	E	A	Q	K	H	G	Y	Q	G	Y	K	T	R	F	G	Y	G	P	K	D	G	P	A	G	M	R	E	N	L	K	R	V	E	A	L	R	E	V	L	G	Y	D	V	D	L	M	L	E	C	Y	M	G	W	N	L	D	Y	T	K	R	M	L	P	K	L	E	R	F	E	P
Template Known Secondary structure															T	T	T		S										G	G	G																					S	S	S							T	T		S													G	G	G
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																												.										.
Query SS confidence																																																												.										.
Query Sequence		D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	.	S	N	I	I	G	I	K	D	T	.	I	D	S	V	A	H	L	R	S	M	I
Query Conservation																																																												.										.
Alig confidence			.	.	.	.	.	.	.																												.	.	.	.	.	.																		.										.
Template Conservation			.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Sequence		R	.	.	.	.	.	.	.	W	L	E	E	P	V	I	A	D	D	V	A	G	Y	A	E	L	N	A	M	G	I	V	P	I	S	G	.	.	.	.	.	.	G	E	H	E	F	S	V	M	G	C	A	E	L	I	N	R	K	A	V	S	V	L	Q	Y	D	T	N	R	V	G	G	I	T	A	A	Q	K	I	N
Template Known Secondary structure		S	.	.	.	.	.	.	.						S		T	T											T		S	S					.	.	.	.	.	.		T	T			S										T	T			S										T
Template Predicted Secondary structure			.	.	.	.	.	.	.																												.	.	.	.	.	.
Template SS confidence
		260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.							.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	Y	D	D	H	L	F	N	T	L	L	L	G	G	D	G	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	A	E	A	A	Q	I	I	V	I	P	H	A	G	Q	M	H	N	Y	H	L	T	M	A	N	M	N	C	P	I	S
Template Known Secondary structure								T						S	S		S									T		T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions