|   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
T | A | A | L | I | D | D | L | I | K | A | G | V | D | G | L | F | F | L | G | S | G | G | E | F | S | Q | L | G | A | E | E | R | K | A | I | A | R | F | A | I | D | H | V | D | R | R | V | P | V | L | I | G | . |
. |
. |
. |
. |
. |
. |
T | G | G | T | N | A | R | E | T | I | E | L | S | Q | H | A | Q | Q | . |
. |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
| . | . | . | . | . | . | . |
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |   | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | A | A | I | V | E | R | A | L | E | A | G | V | T | Q | X | L | L | T | G | T | . |
. |
. |
. |
. |
. |
. |
S | L | A | V | S | E | Q | A | L | E | L | C | Q | Q | L | D | A | S | G | A | H | L | F | A | T | A | G | V | H | P | H | D | A | K | A | W | D | T | D | S | E | R | Q | L | R | L | L | L | S | E | P | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | S | S |  |  |  |  |  |
|
|
| G | G | G | G | G | G |
|
| T | T |  |  |  |  |  |  |  |  |  | T | S | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
  |   |
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
A | G | A | D | G | I | V | V | I | N | P | Y | Y | W | K | V | S | E | A | N | L | I | R | Y | F | E | Q | V | A | D | S | V | T | L | P | V | M | L | Y | N | F | P | A | L | T | G | Q | D | L | T | P | A | L | V | K | T | L | A | D | S | R | S | . |
. |
N | I | I | G | I | K | D | T | I | D | S | V | A |
Query Conservation |   |
. | . | . |   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
| . | . |   |
|   |
|
|
|   |
|   |   |
|   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|
|   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |
Template Sequence |   |
V | R | A | V | G | E | C | G | L | D | F | N | R | D | F | S | P | R | P | L | Q | E | K | A | L | E | A | Q | L | T | L | A | A | Q | L | R | L | P | V | F | L | H | E | . |
. |
. |
. |
. |
. |
R | D | A | S | E | R | L | L | A | I | L | K | D | Y | R | D | H | L | T | G | A | V | V | H | C | F | T | G | E | R | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T | T |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  | . | . | . | . | . | . |  | S |
|  |  |  |  |  |  |  |  |  | T | T | G | G | G |
| S |
|  |  |  |
| S |
|
|
|
|  |  |
Template Predicted Secondary structure |   |
|  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
  |
  |   |
175 | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
H | L | R | S | M | I | H |
Query Conservation |   |
  |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
Template Sequence |   |
A | L | F | A | Y | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
166 | . | . | . | 170 | . | . |
  |