Job Description P75682 Confidence 96.76% Date Thu Jan 5 12:13:03 GMT 2012 Rank 62 Aligned Residues 219 % Identity 16% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.										.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query Sequence		P	V	S	T	I	F	T	A	D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	.	.	.	.	.	.	.	.	.	G	S	G	G	E	F	S	Q	.	.	.	.	.	.	.	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V
Query Conservation																																					.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																			.
Template Conservation																																																																															.
Template Sequence		G	A	F	V	P	F	V	T	I	G	D	P	N	P	E	Q	S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	P	D	I	C	F	E	L	I	A	Q	I	R	A	R	N	P	.	E	T
Template Known Secondary structure										T	T	S	S															T	T		S	S										T	T																T	T																		T	.	T	S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.
		77	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		P	V	L	I	G	T	G	G	T	N	A	R	.	.	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K
Query Conservation														.	.
Alig confidence														.	.																				.	.					.	.	.	.																									.	.	.	.	.
Template Conservation																																			.	.					.	.	.	.																									.	.	.	.	.
Template Sequence		P	I	G	L	L	M	Y	A	N	L	V	Y	A	R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	.	.	A	D	V	P	.	.	.	.	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P	P	.	.	.	.	.	T	A	S	D	E	T	L	R
Template Known Secondary structure														T	T													T							.	.	T	T	S		.	.	.	.	G	G	G											T	T									T	.	.	.	.	.	T			S
Template Predicted Secondary structure																																			.	.					.	.	.	.																									.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		T	L	A	D	S	R	S	N	I	I	G	I	K	D	T	I	D	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	.	.	.	Y	D	D	H	L	F	N	T	L	L	L	G	G	D	G	A	I	S	A	S	G	N	F	A	P	Q	V	S	V	N	L	L	K	A	W	R
Query Conservation																																											.	.	.
Alig confidence																			.	.	.	.																					.	.	.																						.	.	.	.	.	.
Template Conservation																			.	.	.	.																																													.	.	.	.	.	.
Template Sequence		A	V	A	Q	L	G	K	G	Y	T	Y	L	L	S	R	A	P	.	.	.	.	V	H	A	L	L	E	R	L	Q	Q	F	D	A	P	P	A	L	L	G	F	G	I	S	E	P	A	Q	V	K	Q	A	I	E	A	G	A	A	G	A	I	S	G	S	A	.	.	.	.	.	.	V	V	K	I	I	E	T	H	L
Template Known Secondary structure									S										.	.	.	.											T	T								S	S			S										T	T		S					S	S		.	.	.	.	.	.								T	T
Template Predicted Secondary structure																			.	.	.	.																																													.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	D	V	A	K	A	A	G	Y	H	Q	T	L	L	Q	I	P	Q	M	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	P	A	K	Q	L	T	E	L	A	N	F	T	Q	A	M	K	K	A	T	K
Template Known Secondary structure		T																			T	T	B
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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