Job Description P75682 Confidence 95.91% Date Thu Jan 5 12:13:03 GMT 2012 Rank 93 Aligned Residues 127 % Identity 18% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.																.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.																						.	.	.
Query SS confidence																														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.																						.	.	.
Query Sequence		K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	.	S	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	E	R	.	.	.	.	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	.	.	.
Query Conservation																														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.																						.	.	.
Alig confidence																														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.																						.	.	.
Template Conservation
Template Sequence		R	R	W	H	R	N	A	V	R	R	S	I	E	A	G	Y	D	I	V	Y	V	Y	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D	T	L	D	E	C	A	G	R	A	A	V	A	C	R	I	T	V	E
Template Known Secondary structure																T		S								T	T		S								T	T	T					S	T	T	S	S	S					T															S	S	S	S								S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
						83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.								.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.																															.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																															.	.	.	.	.	.	.
Query Sequence		.	.	.	.	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	.	.	.	.	.	.	.	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A
Query Conservation		.	.	.	.																															.	.	.	.	.	.	.
Alig confidence		.	.	.	.																		.													.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																							.																																													.	.	.	.	.	.
Template Sequence		E	E	I	D	G	G	I	T	R	E	D	I	E	G	V	L	R	E	L	G	E	.	L	P	D	L	W	D	F	A	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	Q	E	E	F	V	A	G	L	K	K	L	T	T	K	P	V	V	G	.	.	.	.	.	.	V	G	R	F	T	S	P	D
Template Known Secondary structure				S	T	T	S														T	T	.	S	S	S							S	S					S			T	T	T			T	T	T	T					T	T	T	G	G	G		S	S					.	.	.	.	.	.		S
Template Predicted Secondary structure																							.																																													.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.							300	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	K	T	L	A	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	V	R	Q	I	K	A
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions