Job Description P75682 Confidence 60.60% Date Thu Jan 5 12:13:03 GMT 2012 Rank 428 Aligned Residues 189 % Identity 17% Template c3k2gA_ PDB info PDB header:resiniferatoxin binding protein Chain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.													.	.	.	.	90	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	N	A	R	E	T	I	E
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.														.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.														.	.
Template Sequence		D	L	D	L	A	I	A	E	V	K	Q	F	A	A	V	G	G	R	S	I	V	D	P	T	C	R	G	I	G	R	.	.	.	.	.	.	D	P	V	K	L	R	R	I	S	A	E	T	G	.	.	V	Q	V	V	X	G	A	G	Y	Y	L	A	S	S	X	P	E	T	A	A	R	L	S	A	D	D	I	A	D
Template Known Secondary structure																T	T										B	T	T	T		.	.	.	.	.	.														.	.								S	B			G	G	G			G	G	G	G	T
Template Predicted Secondary structure																																.	.	.	.	.	.														.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.								.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure														.	.	.	.	.	.	.		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	Q	H	A	Q	Q	A	G	A	D	G	.	.	.	.	.	.	.	I	.	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.	.		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	V	A	E	A	L	E	G	T	D	G	T	D	A	R	I	G	L	I	G	E	I	G	V	S	S	D	F	T	A	E	E	E	K	S	L	R	G	A	A	R	A	Q	V	R	T	G	L	P	L	X	V	H	L	P	G	W	F	R	L	A	H	R	V	L	D	L	V	E	E	E	G	A	D	L	R	H	T	V
Template Known Secondary structure									T		B	T	T	B	S				S	S								T	T																													T	T	S													T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
				142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.														.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	S	N	I	I	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	T	I	D	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	Y	D	D	H	L	F	N	T	L	L	L
Query Conservation		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																		.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		L	C	H	X	N	P	S	H	X	D	P	V	Y	Q	A	T	L	A	Q	.	R	G	A	F	L	E	F	D	X	I	G	X	D	F	F	Y	A	D	Q	G	V	Q	C	P	S	D	D	E	V	A	R	A	I	L	G	L	A	D	H	G	Y	L	D	R	I	L	L	S	H	D	V	F	V	K	X	X	L	T	R	Y
Template Known Secondary structure						G	G	G	T	T											.		T								T	T						T	T	T	T																			T	T		G	G	G									S	G	G	G	S	G	G	G
Template Predicted Secondary structure																					.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	D	G	A	I	S	A	S	G	N	F	A	P	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	N	G	Y	A	F	V	T	K	H	F	L	P	R	L
Template Known Secondary structure		T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions