Job Description P75682 Confidence 90.81% Date Thu Jan 5 12:13:03 GMT 2012 Rank 193 Aligned Residues 215 % Identity 16% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A
Query Conservation
Alig confidence																											.	.	.	.	.																	.	.																.	.	.	.	.
Template Conservation																											.	.	.	.	.																	.	.																.	.	.	.	.
Template Sequence		F	F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	.	.	.	.	.	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	.	.	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	.	.	.	.	.	M	D	D	A	R	V	A	V	E	T	G	V
Template Known Secondary structure																			T		S						.	.	.	.	.		G	G	G													.	.	T	S			S	S								S		.	.	.	.	.										T	T
Template Predicted Secondary structure																											.	.	.	.	.																	.	.																.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure												.	.	.	.	.																				.	.																				.	.																						.	.
Query SS confidence												.	.	.	.	.																				.	.																				.	.																						.	.
Query Sequence		D	G	I	V	V	I	N	P	Y	Y	.	.	.	.	.	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	.	.	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	.	.	A	L	V	K	T	L	A	D	S	R	S	N	I	I	G	I	K	D	T	I	D	.	.
Query Conservation												.	.	.	.	.																				.	.																				.	.																						.	.
Alig confidence												.	.	.	.	.																				.	.																				.	.																						.	.
Template Conservation
Template Sequence		D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A	D	T	V	G	C	A
Template Known Secondary structure		S								G	G	G																										T	T								T	T	G	G	G	S																		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.
Predicted Secondary structure																		.											.	.	.	.	.												.	.	.								.	.	.	.																.	.	.	.	.	.
Query SS confidence																		.											.	.	.	.	.												.	.	.								.	.	.	.																.	.	.	.	.	.
Query Sequence		S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	.	P	H	F	T	V	L	C	G	Y	D	.	.	.	.	.	D	H	L	F	N	T	L	L	L	G	G	.	.	.	D	G	A	I	S	A	S	.	.	.	.	G	N	F	A	P	Q	V	S	V	N	L	L	K	A	W	.	.	.	.	.	.	R	D
Query Conservation																		.											.	.	.	.	.												.	.	.								.	.	.	.																.	.	.	.	.	.
Alig confidence																		.											.	.	.	.	.												.	.	.								.	.	.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I	D	T	S	I	L	G	I	G	E	R	N	G	I	T	P	L	G	A	L	L	A	R	M	Y	V	T	D	R	E	Y	I	T	H	K
Template Known Secondary structure																		S	S							B		T	T	S													T							B	G	G	G		S	S	T	T		B		B
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	V	A	K	A	A	G	Y	H	Q	T	L	L	Q	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	L	N	Q	L	R	E	L	E	N	L	V	A	D	A	V
Template Known Secondary structure		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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