Job Description P75682 Confidence 94.67% Date Thu Jan 5 12:13:03 GMT 2012 Rank 126 Aligned Residues 198 % Identity 17% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	F	T	A	D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q
Query Conservation
Alig confidence																																		.	.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		T	T	L	R	D	G	E	N	F	D	V	K	E	K	I	Q	I	A	L	Q	L	E	K	L	G	I	D	V	I	E	A	G	.	.	.	.	.	F	P	I	S	S	P	G	D	F	E	C	V	K	A	I	A	K	A	I	K	H	C	S	V	T	G	L	A	R	C	V	E	G	D	I	D	R	A	E	E	A	L	K
Template Known Secondary structure			T	T	T																					T		S						.	.	.	.	.		G	G	G																	S	S								S	S												T
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																				.	.																				.	.
Query SS confidence																			.	.	.	.																				.	.																				.	.
Query Sequence		H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	.	.	.	.	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	.	.	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	.	.	A	L	V	K	T	L	A	D	S	R	S	N	I	I	G	I	K
Query Conservation																			.	.	.	.																				.	.																				.	.
Alig confidence																			.	.	.	.																				.	.																				.	.
Template Conservation
Template Sequence		D	A	V	S	P	Q	I	H	I	F	L	A	T	S	D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H	I	S	Y	A	R	Q	K	F	D	V	V	Q	F	S	P	E	D	A	T	R	S	D	R	A	F	L	I	E	A	V	Q	T	A	I	D	A	G	A	T	V	I	N	I	P
Template Known Secondary structure		T		S	S										S							T	T																				T	T		S								T	G	G	G	S															T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		168	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																		.	.	.	.	.										.	.	.	.	.
Query SS confidence						.	.																		.	.	.	.	.										.	.	.	.	.
Query Sequence		D	T	I	D	.	.	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	.	.	.	.	.	H	F	T	V	L	C	G	Y	D	.	.	.	.	.	D	H	L	F	N	T	L	L	L	G	G	D	G	A	I	S	A	S	G	N	F
Query Conservation						.	.																		.	.	.	.	.										.	.	.	.	.
Alig confidence						.	.																		.	.	.	.	.										.	.	.	.	.
Template Conservation
Template Sequence		D	T	V	G	Y	T	N	P	T	E	F	G	Q	L	F	Q	D	L	R	R	E	I	K	Q	F	D	D	I	I	F	A	S	H	C	H	D	D	L	G	X	A	T	A	N	A	L	A	A	I	E	N	G	A	R	R	V	E	G	T	I	N	G	I
Template Known Secondary structure			S	S	S																			T	T	G	G	G	S							B		T	T	S												T	T							B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions