Job Description P75682 Confidence 94.50% Date Thu Jan 5 12:13:03 GMT 2012 Rank 133 Aligned Residues 222 % Identity 17% Template c3eegB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii Resolution 2.78 Å

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		21	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		D	G	.	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q
Query Conservation				.
Alig confidence				.																										.	.	.	.	.																						.	.	.
Template Conservation																														.	.	.	.	.																						.	.	.
Template Sequence		D	G	E	Q	L	N	T	E	E	K	I	I	V	A	K	A	L	D	E	L	G	V	D	V	I	E	A	G	.	.	.	.	.	F	P	V	S	S	P	G	D	F	N	S	V	V	E	I	T	K	A	V	T	R	.	.	.	P	T	I	C	A	L	T	R	A	K	E	A	D	I	N	I	A	G	E	A	L	R	F
Template Known Secondary structure			S																	T	T	T		S						.	.	.	.	.		T	T	T													T	T			S	.	.	.	S								S													T	T
Template Predicted Secondary structure																														.	.	.	.	.																						.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.								.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																					.	.																			.	.
Query SS confidence															.	.	.	.	.	.	.																					.	.																			.	.
Query Sequence		A	G	A	D	G	I	V	V	I	N	P	Y	Y	.	.	.	.	.	.	.	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	.	.	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	.	.	A	L	V	K	T	L	A	D	S	R	S	N	I	I	G	I	K	D
Query Conservation															.	.	.	.	.	.	.																					.	.																			.	.
Alig confidence															.	.	.	.	.	.	.																					.	.																			.	.
Template Conservation
Template Sequence		A	K	R	S	R	I	H	T	G	I	G	S	S	D	I	H	I	E	H	K	L	R	S	T	R	E	N	I	L	E	X	A	V	A	A	V	K	Q	A	K	K	V	V	H	E	V	E	F	F	C	E	D	A	G	R	A	D	Q	A	F	L	A	R	X	V	E	A	V	I	E	A	G	A	D	V	V	N	I	P	D
Template Known Secondary structure			S	S										S							T	S	T	T			T	T	T	T														S	S								S	T	T	T	S														T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		169	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																			.	.	.	.	.									.	.	.	.	.												.	.	.									.	.	.	.
Query SS confidence					.	.																			.	.	.	.	.									.	.	.	.	.												.	.	.									.	.	.	.
Query Sequence		T	I	D	.	.	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	H	.	.	.	.	.	F	T	V	L	C	G	Y	D	.	.	.	.	.	D	H	L	F	N	T	L	L	L	G	G	.	.	.	D	G	A	I	S	A	S	G	.	.	.	.	N	F	A	P	Q	V	S	V	N	L	L	K	A
Query Conservation					.	.																			.	.	.	.	.									.	.	.	.	.												.	.	.									.	.	.	.
Alig confidence					.	.																			.	.	.	.	.									.	.	.	.	.												.	.	.									.	.	.	.
Template Conservation
Template Sequence		T	T	G	Y	X	L	P	W	Q	Y	G	E	R	I	K	Y	L	X	D	N	V	S	N	I	D	K	A	I	L	S	A	H	C	H	N	D	L	G	L	A	T	A	N	S	L	A	A	L	Q	N	G	A	R	Q	V	E	C	T	I	N	G	I	G	E	R	A	G	N	T	A	L	E	E	V	V	X	A	X	E	C
Template Known Secondary structure		S	S	S																			T	T	G	G	G	S							B		S	S	S											T	T	T							B	G	G	G			S	T	T		B		B										T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		230	.	.	.								.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure						.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.
Query Sequence		W	R	D	G	.	.	.	.	.	.	.	D	V	A	K	A	A	G	Y	H	Q	T	L	L	Q	I	P	Q
Query Conservation						.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	K	E	T	L	G	L	E	T	G	I	N	H	K	K	L	V	P	I	S	H	L	V	S	T	L	X	R
Template Known Secondary structure		T									S			G	G	G												T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions