Job Description P75682 Confidence 100.00% Date Thu Jan 5 12:13:03 GMT 2012 Rank 30 Aligned Residues 291 % Identity 23% Template c3e96B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 bacillus clausii Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		M	P	Q	S	A	L	F	T	G	I	I	P	P	V	S	T	I	F	T	A	.	D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L
Query Conservation																						.
Alig confidence				.	.																	.
Template Conservation				.	.
Template Sequence		L	A	.	.	K	A	L	E	T	I	S	G	I	P	I	T	P	F	R	K	S	D	G	S	I	D	W	H	H	Y	K	E	T	V	D	R	I	V	D	N	G	I	D	V	I	V	P	C	G	N	T	S	E	F	Y	A	L	S	L	E	E	A	K	E	E	V	R	R	T	V	E	Y	V	H	G	R	A	L	V	V
Template Known Secondary structure			T	.	.	T	T	T	S	S									B		T	T	T			B														T	T	T						T	T	S	T	T	T	T	G	G	G	S																	T	T	S	S
Template Predicted Secondary structure				.	.
Template SS confidence
		8	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S
Query Conservation
Alig confidence							.																																																									.	.	.	.														.
Template Conservation							.																																																									.	.	.	.														.
Template Sequence		A	G	I	G	Y	.	A	T	S	T	A	I	E	L	G	N	A	A	K	A	A	G	A	D	A	V	M	I	H	M	P	I	H	P	Y	V	T	A	G	G	V	Y	A	Y	F	R	D	I	I	E	A	L	D	F	P	S	L	V	Y	F	K	D	.	.	.	.	P	E	I	S	D	R	V	L	V	D	L	A	P	.
Template Known Secondary structure						S	.	S															T		S										S																				S									.	.	.	.	T	T	S		T							T	T	.
Template Predicted Secondary structure							.																																																									.	.	.	.														.
Template SS confidence
		86	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		R	S	N	I	I	G	I	K	D	T	I	D	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	Y	D	D	H	L	F	N	T	.	L	L	L	G	G	D	G	A	I	S	A	S	G	N	F	A	P	Q	V	S	V	N	L	L	K	A	W	R	D	G	D	V	A	K	A
Query Conservation																																														.
Alig confidence																													.																	.
Template Conservation																													.
Template Sequence		L	Q	N	L	V	G	V	K	Y	A	I	N	D	L	P	R	F	A	K	V	V	R	S	I	P	E	E	.	H	Q	I	A	W	I	C	G	T	A	E	K	W	A	P	F	F	W	H	A	G	A	K	G	F	T	S	G	L	V	N	L	L	P	Q	K	A	V	E	M	L	E	A	L	R	N	N	D	N	D	A	V
Template Known Secondary structure			T	T																			T	T	S		G	G	.	G							T	T		T	T	T								T							S	G	G	G	T														T	T
Template Predicted Secondary structure																													.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		A	G	Y	H	Q	T	L	L	Q	I	P	Q	M	Y	Q	L	D	.	.	T	P	F	V	N	V	I	K	E	A	I	V	L	C	G	R	P	V	S	T	H	V	L	P	P	A	S	P	L	D	E	P	R	K	A	Q	L	K	T	L	L	Q	Q	L	K	L
Query Conservation																			.	.
Alig confidence																			.	.																		.
Template Conservation																																						.
Template Sequence		W	R	I	W	E	D	I	V	P	F	E	D	L	R	G	K	Y	N	Q	G	N	N	V	V	V	I	K	E	A	M	E	M	L	R	Q	N	.	A	G	V	T	R	A	P	V	N	E	L	S	N	E	D	K	Q	L	V	T	E	L	L	S	S	W	K	L
Template Known Secondary structure																T	T	T	T	T	T	T	T	T										T	T			.		B				T	T																			T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions