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Job DescriptionP75682
Confidence100.00%DateThu Jan 5 12:13:03 GMT 2012
Rank32Aligned Residues290
% Identity23%Templatec3d0cB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10........ .20.........30.........40.........50.........60.........70.........80..
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Query Sequence  SALFTGIIPPVSTIF. TADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT
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Template Sequence  SKRFSTISGINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI
Template Known Secondary structure  GGGGSS




B
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TTSGGGTGGGS
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSN
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Template Sequence  GY. SVDTAIELGKSAIDSGADCVXIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYFKDAH. . . . LSDDVIKELAP. LDK
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   87. .90.........100.........110.........120.........130.........140...... ...150....... ..160
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  IIGIKDTIDSVAHLRSMIHTVKGAHPHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYH
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Template Sequence  LVGIKYAINDIQRVTQVXRAVPKSSNVAFICGTAEKWAPFFYHAGAVGFTSGLVNVFPQKSFALLEALEEGNQEKIWDVW
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   243......250.. .......260.........270.........280.........290.........300
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Query Sequence  QTLLQIPQMY. . QLDTPFVNVIKEAIVLCGRPVSTHVLPPASPLDEPRKAQLKTLLQQLK
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Template Sequence  EDVVPFEDLRAKHNNGNNVVIIKEAXEQLGLR. AGVTREPVNPLSPNDRLELEELLKSWN
Template Known Secondary structure  TTTT

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   241........250.........260.........270.. .......280.........290.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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