Job Description P75682 Confidence 71.12% Date Thu Jan 5 12:13:03 GMT 2012 Rank 373 Aligned Residues 132 % Identity 13% Template c2zdsB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2) Resolution 2.30 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	E	V	C	R	L	A	R	D	F	G	Y	D	G	L	E	L	A	C	W	G	D	H	F	E	V	D	K	A	L	A	D	P	S	Y	V	D	S	R	H	Q	L	L	D	K	Y	G	L	K	C	W	A	I	S	N	H	L	V	G	Q	A	V	C	D	A	I	I	D	E	R	H	E	A	I	L	P	A	R	I
Template Known Secondary structure													T		S						S	S	T	T	T										T	T												T	T		B		S														S	S		S							S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
															87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	.	.	.	T	L	P	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		W	G	D	G	D	A	E	G	V	R	Q	R	A	A	A	E	I	K	D	T	A	R	A	A	A	R	L	G	V	D	T	V	I	G	F	T	G	S	A	I	W	H	L	V	A	X	F	P	P	A	P	E	S	X	I	E	R	G	Y	Q	D	F	A	D	R	W	N	P	I	L	D	V	F	D	A	E	G	V	R	F
Template Known Secondary structure			T	T																									T											S	S	G	G	G	T	T			S																													T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	S	N
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		A	H	E	V	H	P	S	E	.	.	I	A	Y	D	Y	W	T	T	H	R	A	L	E	A	V	G	H
Template Known Secondary structure							T	T	S	.	.	S			S											T	T	T
Template Predicted Secondary structure										.	.
Template SS confidence
		176	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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