Job Description P75682 Confidence 100.00% Date Thu Jan 5 12:13:03 GMT 2012 Rank 21 Aligned Residues 289 % Identity 25% Template c2vc6A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound Resolution 1.95 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	T	G	I	I	P	P	V	S	T	I	F	T	A	D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		M	F	E	G	S	I	T	A	L	V	T	P	F	A	.	D	D	R	I	D	E	V	A	L	H	D	L	V	E	W	Q	I	E	E	G	S	F	G	L	V	P	C	G	T	T	G	E	S	P	T	L	S	K	S	E	H	E	Q	V	V	E	I	T	I	K	T	A	N	G	R	V	P	V	I	A	G	A	G	S	N
Template Known Secondary structure																.	T	T																	T	T		S				T	T	S	G	G	G	T	G	G	G	S																	T	T	S	S		B							S
Template Predicted Secondary structure																.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	S	N	I	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	A	E	A	I	A	F	V	R	H	A	Q	N	A	G	A	D	G	V	L	I	V	S	P	Y	Y	N	K	P	T	Q	E	G	I	Y	Q	H	F	K	A	I	D	A	A	S	T	I	P	I	I	V	Y	N	I	P	G	R	S	A	I	E	I	H	V	E	T	L	A	R	I	F	E	D	C	P	N	V	K	G
Template Known Secondary structure		S														T	T		S									S	S																			S	S												S																T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	D	T	I	D	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	Y	D	D	H	L	F	N	T	L	L	L	G	G	D	G	A	I	S	A	S	G	N	F	A	P	Q	V	S	V	N	L	L	K	A	W	R	D	G	D	V	A	K	A	A	G	Y	H	Q	T	L
Query Conservation
Alig confidence																			.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		V	D	A	T	G	N	L	L	R	P	S	L	E	R	M	A	C	.	.	.	.	G	E	D	F	N	L	L	T	G	E	D	G	T	A	L	G	Y	M	A	H	G	G	H	G	C	I	S	V	T	A	N	V	A	P	A	L	C	A	D	F	Q	Q	A	C	L	N	G	D	F	A	A	A	L	K	L	Q	D	R	L
Template Known Secondary structure					S			T										S	.	.	.	.		T	T	S	B				S		G	G	G							T	T							S	G	G	G	T														T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	I	P	Q	M	Y	Q	L	D	T	P	F	V	N	V	I	K	E	A	I	V	L	C	G	R	P	V	S	T	H	V	L	P	P	A	S	P	L	D	E	P	R	K	A	Q	L	K	T	L	L	Q	Q	L	K	L
Query Conservation
Alig confidence										.																			.
Template Conservation										.																			.
Template Sequence		M	P	L	H	R	A	L	F	.	L	E	T	N	P	A	G	A	K	Y	A	L	Q	R	L	G	R	M	.	R	G	D	L	R	L	P	L	V	T	I	S	P	S	F	Q	E	E	I	D	D	A	M	R	H	A	G	I
Template Known Secondary structure								T	T	.	S	S	S	T	T										T	T	S	S	.						T	T																			T	T	S
Template Predicted Secondary structure										.																			.
Template SS confidence
		237	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions