Job Description P75682 Confidence 94.62% Date Thu Jan 5 12:13:03 GMT 2012 Rank 129 Aligned Residues 226 % Identity 16% Template c2qygC_ PDB info PDB header:unknown function Chain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris Resolution 3.30 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		P	P	V	S	T	I	F	T	A	D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	.	.	.	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R
Query Conservation																																																																.	.	.
Alig confidence																																																																.	.	.
Template Conservation
Template Sequence		P	I	F	F	G	V	I	K	P	N	I	G	L	P	P	Q	P	F	A	E	L	G	Y	Q	S	W	T	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	D	W	C	P	L	A	E	R	A	A	L	L	G	D	A	C	R	R	A	S	A	E	T	G	V	P	K	I	Y	L	A	N	I	T	D	E	V	D
Template Known Secondary structure									S	S		T	T			S														T		S						T	T			S		T	T	S																					S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																		.	110	.	.	.	.	.	.	.	.	.	120	.	.											.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	.	.	.	.	.	.	.	.	.	.	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	T	E	L	H	D	V	A	V	A	N	G	A	G	A	L	L	I	N	A	M	P	V	G	L	S	A	V	R	M	L	R	K	H	A	T	V	P	L	I	A	H	F	P	F	I	A	A	F	S	R	L	A	N	Y	G	I	H	S	R	V	M	T	R	L	Q	R	L	A	G	F	D	V	V	I	M	P	G	F
Template Known Secondary structure													T	T																					T	T			S							T	T						S		T	T	S															T		S							S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.																												.
Query SS confidence																					.	.	.	.	.	.	.																												.
Query Sequence		A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	.	.	.	.	.	.	.	S	N	I	I	G	I	K	D	T	I	D	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	.	P	H	F	T	V	L	C	G	Y	D	D	H	L	F	N	T	L	L	L	G	G	D	G	A	I	S
Query Conservation																					.	.	.	.	.	.	.																												.
Alig confidence				.																	.	.	.	.	.	.	.																								.	.	.		.									.	.	.	.	.	.	.	.	.	.
Template Conservation				.																																															.	.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	.	R	M	M	T	P	E	H	E	V	L	D	C	I	R	A	C	L	E	P	M	G	P	I	K	P	C	L	P	V	P	G	G	S	D	S	A	A	T	L	E	N	V	Y	R	K	V	.	.	.	G	S	A	D	F	G	F	V	P	G	.	.	.	.	.	.	.	.	.	.	R	G	V	F	G	H	P	M
Template Known Secondary structure		S	G	.	G	G																S		B	T	T	B									S	S			T	T	T									.	.	.		S	S							S	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T		T	T
Template Predicted Secondary structure				.																																															.	.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.											.	.	.	.	.	.	.	390
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	S	G	N	F	A	P	Q	V	S	V	N	L	L	K	A	W	R	D	G	.	D	V	A	K	A	A	G	Y	H	Q	T	L	L	Q	I	P	Q	M	Y
Query Conservation																						.
Alig confidence								.														.
Template Conservation								.
Template Sequence		G	P	A	A	G	A	.	T	S	I	R	Q	A	W	D	A	I	A	A	G	I	P	V	P	D	H	A	A	S	H	P	E	L	A	A	A	L	R	A	F
Template Known Secondary structure								.												T	T							G	G	G
Template Predicted Secondary structure								.
Template SS confidence
		391	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions