Job Description P75682 Confidence 53.59% Date Thu Jan 5 12:13:03 GMT 2012 Rank 462 Aligned Residues 152 % Identity 16% Template c2qw5B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase-like tim barrel; PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution Resolution 1.78 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																								.	.																																		.	.	.	.	.
Query SS confidence															.	.	.	.																								.	.																																		.	.	.	.	.
Query Sequence		F	T	A	D	G	Q	L	D	K	P	G	T	A	.	.	.	.	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	.	.	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	.	.	.	.	.
Query Conservation															.	.	.	.																								.	.																																		.	.	.	.	.
Alig confidence															.	.	.	.																								.	.																																		.	.	.	.	.
Template Conservation
Template Sequence		F	T	T	N	L	Q	P	D	N	L	D	Y	R	R	I	V	V	A	H	I	K	K	L	Q	R	F	G	Y	S	G	F	E	F	P	I	A	P	G	L	P	E	N	Y	A	Q	D	L	E	N	Y	T	N	L	R	H	Y	L	D	S	E	G	L	E	N	V	K	I	S	T	N	V	G	A	T	R	T	F	D	P	S
Template Known Secondary structure		T		S				T	T																		T	T													G	G	G																		T	T	T	T	T											S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
												87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																						.	.	120	.	.	.	.	.	.	.	.	.	130	.				.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	.	.	.	T
Query Conservation		.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		S	N	Y	P	E	Q	R	Q	E	A	L	E	Y	L	K	S	R	V	D	I	T	A	A	L	G	G	E	I	X	X	G	P	I	V	I	P	Y	G	V	F	P	T	T	D	F	N	E	P	I	W	S	D	E	L	Q	E	H	L	K	V	R	Y	A	N	A	Q	P	I	L	D	K	L	G	E	Y	A	E	I	K	K
Template Known Secondary structure			S	S																					T	T		S							S	S		T	T				B		T	T			B																															T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.													.	.
Query SS confidence																		.													.	.
Query Sequence		L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	.	T	P	A	L	V	K	T	L	A	D	S	R	.	.	S	N	I	I	G	I	K	D	T
Query Conservation																		.													.	.
Alig confidence																		.													.	.
Template Conservation
Template Sequence		V	K	L	A	I	E	P	I	T	H	W	E	T	P	G	P	N	K	L	S	Q	L	I	E	F	L	K	G	V	K	S	K	Q	V	G	V	V	I	D	S
Template Known Secondary structure											T	T	T		S	S			S										T				T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions