Job Description P75682 Confidence 100.00% Date Thu Jan 5 12:13:03 GMT 2012 Rank 38 Aligned Residues 278 % Identity 29% Template c2pcqA_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthase; PDBTitle: crystal structure of putative dihydrodipicolinate synthase (ttha0737)2 from thermus thermophilus hb8 Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	I	P	P	V	S	T	I	F	T	A	D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R
Query Conservation
Alig confidence																													.																																	.	.	.	.
Template Conservation																													.																																	.	.	.	.
Template Sequence		X	I	L	P	P	I	P	T	P	F	D	R	E	G	R	L	D	E	E	A	F	R	E	L	A	Q	A	.	L	E	P	L	V	D	G	L	L	V	Y	G	S	N	G	E	G	V	H	L	T	P	E	E	R	A	R	G	L	R	A	L	.	.	.	.	R	P	R	K	P	F	L	V	G	L	X	E	E	T	L	P
Template Known Secondary structure											B		T	T			B												.		G	G	G	S	S					T		T	T	T	T	G	G	G	S											T		.	.	.	.			S	S									S	S
Template Predicted Secondary structure																													.																																	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	.	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	S	N	I	I	G	I	K
Query Conservation																								.
Alig confidence																								.																				.	.																												.
Template Conservation																																												.	.																												.
Template Sequence		Q	A	E	G	A	L	L	E	A	K	A	A	G	A	X	A	L	L	A	T	P	P	R	Y	Y	H	G	S	L	G	A	G	L	L	R	Y	Y	E	A	L	A	E	.	.	K	X	P	L	F	L	Y	H	V	P	Q	N	T	K	V	D	L	P	L	E	A	V	E	A	L	A	P	.	H	P	N	V	L	G	I	K
Template Known Secondary structure														T		S									T	T	G	G	G	T	T	T												.	.		S																								T	T	.	S	T	T
Template Predicted Secondary structure																																												.	.																												.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	I	D	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	Y	D	D	H	L	F	N	T	L	L	L	G	G	D	G	A	I	S	A	S	G	N	F	A	P	Q	V	S	V	N	L	L	K	A	W	R	D	G	D	V	A	K	A	A	G	Y	H	Q	T	L	L	Q
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		D	S	S	G	D	L	S	R	I	A	F	Y	Q	A	R	L	.	.	.	.	Q	E	F	R	V	Y	T	G	H	A	P	T	F	L	G	A	L	A	L	G	A	E	G	G	I	L	A	A	A	N	L	A	P	R	A	Y	R	A	L	L	D	H	F	R	E	G	R	L	A	E	A	Q	E	L	Q	K	K	L	F	P
Template Known Secondary structure				S														.	.	.	.	S	S								G	G	G							T	T							G	G	G	G	T														T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		I	P	Q	M	Y	Q	L	D	T	P	F	V	N	V	I	K	E	A	I	V	L	C	G	R	P	V	S	T	H	V	L	P	P	A	S	P	L	D	E	P	R	K	A	.	.	Q	L	K	T	L	L	Q	Q	L	K	L
Query Conservation																																													.	.
Alig confidence											.	.																	.																.	.
Template Conservation											.	.																	.
Template Sequence		L	G	D	L	L	A	K	G	G	.	.	V	P	L	L	K	Q	A	L	R	H	L	G	L	P	A	G	.	Y	P	R	P	P	Y	P	A	E	S	P	L	W	E	R	F	L	P	V	L	E	G	L	K	E	E	G	W
Template Known Secondary structure											.	.											T	T					.				T	T	S		S	S		T	T														T	T
Template Predicted Secondary structure											.	.																	.
Template SS confidence
		229	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions