Job Description P75682 Confidence 92.35% Date Thu Jan 5 12:13:03 GMT 2012 Rank 172 Aligned Residues 187 % Identity 12% Template c2p88E_ PDB info PDB header:lyase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme PDBTitle: crystal structure of n-succinyl arg/lys racemase from2 bacillus cereus atcc 14579 Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	Q	S	A	L	F	T	G	I	I	P	P	V	S	T	I	F	T	A	D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I
Query Conservation
Alig confidence																																																				.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		Q	P	V	Y	Q	L	I	G	G	R	Y	H	E	E	F	P	V	T	H	V	L	S	I	A	D	P	E	N	M	A	E	E	A	A	S	M	I	Q	K	G	Y	Q	S	F	K	M	K	V	G	T	.	.	.	.	.	.	N	V	K	E	D	V	K	R	I	E	A	V	R	E	R	V	G	N	D	I	A	I	R	V
Template Known Secondary structure		S	B	G	G	G	G	T	T					S										S															T	T	T										S	.	.	.	.	.	.																T	T	T	S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		81	.		.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure				.				.
Query SS confidence				.				.
Query Sequence		G	T	.	G	G	T	.	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D
Query Conservation				.				.
Alig confidence				.				.																			.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Sequence		D	V	N	Q	G	W	K	N	S	A	N	T	L	T	A	L	R	S	L	G	H	L	N	I	D	.	.	.	.	.	.	.	W	I	E	Q	P	V	I	A	D	D	I	D	A	M	A	H	I	R	S	K	T	D	L	P	L	M	I	.	.	.	.	.	.	D	E	G	L	K	S	S	R	E	M	R	Q	I	I	K
Template Known Secondary structure				T	T	T	T	B	S										T	S	T	T	T	T		S	.	.	.	.	.	.	.						B		T	T											T			S					.	.	.	.	.	.	S	T	T			S
Template Predicted Secondary structure																											.	.	.	.	.	.	.																												.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		159	160	.		.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure					.									.
Query SS confidence					.									.
Query Sequence		S	R	S	.	N	I	I	G	I	K	D	T	.	I	D	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	Y	D	D	H	L	F	N	T	L	L	L
Query Conservation					.									.
Alig confidence					.									.
Template Conservation
Template Sequence		L	E	A	A	D	K	V	N	I	K	L	M	K	C	G	G	I	Y	P	A	V	K	L	A	H	Q	A	E	M	A	G	I	E	C	Q	V	G	S	M	V	E	S	S	V	A	S	S	A	G	F
Template Known Secondary structure			T			S										T	S														T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions