Job Description P75682 Confidence 88.90% Date Thu Jan 5 12:13:03 GMT 2012 Rank 226 Aligned Residues 174 % Identity 13% Template c2ox4E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of putative dehydratase from zymomonas mobilis zm4 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.											.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																							.												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.																							.												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	Q	S	A	L	F	T	G	I	I	P	P	V	S	T	I	F	T	A	D	G	Q	L	.	.	.	.	.	.	.	.	.	.	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	.	L	G	S	G	G	E	F	S	Q	L	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.																							.												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																							.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	V	Y	K	L	L	G	G	K	N	R	E	D	L	R	V	Y	A	S	Q	L	Q	F	G	W	G	K	E	R	K	S	K	G	R	K	E	E	Y	A	E	E	A	L	K	A	V	A	E	G	Y	D	A	V	K	V	D	V	L	A	H	D	R	N	G	S	R	E	G	V	F	L	E	G	P	L	P	S	E	T
Template Known Secondary structure		S	B	G	G	G	G	T	T			S	S	S	S								G	G	G		S	S	S	S						S														T	T		S						S	S	S	S		T	T	S			T	T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	.	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M
Query Conservation																									.
Alig confidence																									.																								.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		I	K	I	G	V	E	R	V	E	A	I	R	N	A	V	G	P	D	V	D	I	I	V	E	N	H	G	H	T	D	L	V	S	A	I	Q	F	A	K	A	I	E	E	F	N	I	F	.	.	.	.	.	.	.	F	Y	E	E	I	N	T	P	L	N	P	R	L	L	K	E	A	K	K	K	I	D	I	P	L	A
Template Known Secondary structure																		T	T	S							T	T		S													G	G	G			S	.	.	.	.	.	.	.						S		T	T	S	T								T	T			S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																											.									.
Query SS confidence																											.									.
Query Sequence		L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	S	.	N	I	I	G	I	K	D	T	.	I	D	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H
Query Conservation																											.									.
Alig confidence				.	.	.	.	.	.																		.									.
Template Conservation				.	.	.	.	.	.
Template Sequence		S	G	.	.	.	.	.	.	E	R	I	Y	S	R	W	G	F	L	P	F	L	E	D	R	S	I	D	V	I	Q	P	D	L	G	T	C	G	G	F	T	E	F	K	K	I	A	D	M	A	H	I	F	E
Template Known Secondary structure				.	.	.	.	.	.	T	T													T	T			S						T	T	T	T	T															T	T
Template Predicted Secondary structure				.	.	.	.	.	.
Template SS confidence
		263	.							.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions