Job Description P75682 Confidence 94.35% Date Thu Jan 5 12:13:03 GMT 2012 Rank 136 Aligned Residues 261 % Identity 16% Template c2nx9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae Resolution 1.70 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																														.	.	.																															.	.	.	.	.	.
Query SS confidence																														.	.	.																															.	.	.	.	.	.
Query Sequence		Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	.	.	.	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	.	.	.	.	.	.	G	T	G	G	T	N	A	R	E	T	I	E	L
Query Conservation																														.	.	.																															.	.	.	.	.	.
Alig confidence																														.	.	.																															.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	R	I	D	D	M	L	P	I	A	Q	Q	L	D	Q	I	G	Y	W	S	L	E	C	W	G	G	A	T	F	D	S	C	I	R	F	L	G	E	D	P	W	Q	R	L	R	L	L	K	Q	A	M	P	N	T	P	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	A	D	D	V	V	D	T	F
Template Known Secondary structure									T	T	T						T	S			S							T	T									T																T	T	S								G	G	G	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	.	.	.	.	S	N	I	I	G	I	K	D	T
Query Conservation																																																																					.	.	.	.
Alig confidence																				.	.	.	.																													.																	.	.	.	.
Template Conservation																				.	.	.	.																													.
Template Sequence		V	E	R	A	V	K	N	G	M	D	V	F	R	V	F	D	A	M	.	.	.	.	N	D	V	R	N	M	Q	Q	A	L	Q	A	V	K	K	M	G	A	H	A	Q	G	T	L	C	Y	T	T	.	S	P	V	H	N	L	Q	T	W	V	D	V	A	Q	Q	L	A	E	L	G	V	D	S	I	A	L	K	D	M
Template Known Secondary structure									T									T	T	.	.	.	.																	T												.		T	T																T	T		S							S
Template Predicted Secondary structure																				.	.	.	.																													.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure				.	.																											.	.	.	.	.	.												.	.	.																										.	.	.	.	.
Query SS confidence				.	.																											.	.	.	.	.	.												.	.	.																										.	.	.	.	.
Query Sequence		I	D	.	.	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	Y	D	.	.	.	.	.	.	D	H	L	F	N	T	L	L	L	G	G	.	.	.	D	G	A	I	S	A	S	G	N	F	A	P	Q	V	S	V	N	L	L	K	A	W	R	D	G	.	.	.	.	.
Query Conservation				.	.																											.	.	.	.	.	.												.	.	.																										.	.	.	.	.
Alig confidence				.	.																											.	.	.	.	.	.												.	.	.																										.	.	.	.	.
Template Conservation
Template Sequence		A	G	I	L	T	P	Y	A	A	E	E	L	V	S	T	L	K	K	Q	V	D	V	E	L	H	L	H	C	H	S	T	A	G	L	A	D	M	T	L	L	K	A	I	E	A	G	V	D	R	V	D	T	A	I	S	S	M	S	G	T	Y	G	H	P	A	T	E	S	L	V	A	T	L	Q	G	T	G	Y	D	T
Template Known Secondary structure		S	S																		S		S									T	T	S												T	T		S					B		G	G	G		S	T	T	S			B									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
				234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	V	A	K	A	A	G	Y	H	Q	T	L	L	Q	I	P	Q	M	Y	Q	L	D	T	P	F	V	N	V	I	K	E	A	I	V	L	C	G	R	P	V	S	T	H	V	L	P	P	A	S	P	L	D	E	P	R	K	A	Q	L	K	T	L	L	Q	Q	L	K	L
Query Conservation		.	.
Alig confidence		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	D	I	A	K	L	E	Q	I	A	A	Y	F	R	D	V	R	K	K	Y	H	A	F	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	M	M	K	G	S	D	A	R	I	L	V	A	Q	V	P	G	G	M	L	T	N	M	E	S	Q	L	K	Q	Q	N	A
Template Known Secondary structure																					T	T	G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.				S			T																					T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.														.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions