Job Description P75682 Confidence 87.25% Date Thu Jan 5 12:13:03 GMT 2012 Rank 249 Aligned Residues 176 % Identity 13% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A
Query Conservation
Alig confidence												.																.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation												.																.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	S	K	P	V	E	E	L	A	.	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	.	.	.	.	.	R	E	R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	.	.	.	.	.	.	.	.	.	.	G	R	V	D	I	A	L	F	S
Template Known Secondary structure			S		S							.							G	G	G		S					.	.	.	.	.			T	T	S															T	T			G	G	G					.	.	.	.	.	.	.	.	.	.	S							T	T
Template Predicted Secondary structure												.																.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.											.	.	.	.	.	.	.	70	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	S	N	I	I	G	I	K	D	T	I	D	S	V	A	H	L	R	S	M	I
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		T	I	H	R	V	Q	L	P	S	G	S	F	S	P	K	Q	I	R	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	H	L	H	I	G	R	S	V	H	.	S	L	E	E	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F	R	G	V	S	L	L	S	D	I	K
Template Known Secondary structure		T								T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T									.	S										T	T		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	.	Y	D	D	H	L	F	N	T	L	L	L	G	G	D	G	A	I	S	A	S	G	N	F	A	P	Q	V	S	V	N	L	L	K	A	W	R	D
Query Conservation																	.
Alig confidence					.	.	.										.
Template Conservation					.	.	.
Template Sequence		Q	R	I	.	.	.	S	I	P	V	I	A	I	G	G	M	T	P	D	R	L	R	D	V	K	Q	A	G	A	D	G	I	A	V	M	S	G	I	F	S	S	A	E	P	L	E	A	A	R	R	Y	S	R
Template Known Secondary structure					.	.	.		S						S	S			G	G	G							T	T		S					S					T	S	S	S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		145	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions