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Job DescriptionP75682
Confidence96.54%DateThu Jan 5 12:13:03 GMT 2012
Rank71Aligned Residues226
% Identity12%Templatec1rcxH_
PDB info PDB header:lyase (carbon-carbon)Chain: H: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase; PDBTitle: non-activated spinach rubisco in complex with its substrate2 ribulose-1,5-bisphosphate
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60. ........70.........80.......
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Query Sequence  PPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEER. . . . KAIARFAIDHVDRRVPVLIGTGGTNA
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Template Sequence  PLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTC
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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   88.90.........100......... 110.........120.. .......130.......
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Query Sequence  RETIELSQHAQQAGADGIVVIN. . . . . . . . . . . . . . . . . . . . PYYWKVSEANLIR. . . . . . . . . . YFEQVADSVTLPVML
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Template Sequence  EDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIH
Template Known Secondary structure  T
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   248.250.........260.........270.........280.........290.........300.........310.........320.......
 
   138.140.........150.........160 .........170.........180.........190.....
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Query Sequence  YNFPALTGQDLTPALVKTLADSR. . . . . . . . . . . . . . . . . . . . . . SNIIGIKDTIDSVAHLRSMIHTVKGAHPHFTVLCG
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Template Sequence  SGTVVG. KLEGERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIF. . . GDDSVLQFG
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SSS.SS



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BGGGTB
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   328.330... ......340.........350.........360.........370.........380.........390.... .....400...
 
   196...200.........210.........220.........230.... .....240.........250..
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Query Sequence  YDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGD. . . . . . . . . . . . . VAKAAGYHQTLLQIPQMY
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Template Sequence  . . . . . . . . . . GGTLGHPWGNAPGA. VANRVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVW
Template Known Secondary structure  ..........TSTT
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   404.....410....... ..420.........430.........440.........450.........460..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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