Return to main results Retrieve Phyre Job Id

Job DescriptionP31450
Confidence100.00%DateThu Jan 5 11:47:41 GMT 2012
Rank52Aligned Residues141
% Identity15%Templated5ldha1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  MTKFSVVVAGGGSTFTPGIVLMLLANQDRFPLRALKFYDNDGARQEVIAEACKVILKEKAPDIAFSYTTDPEVAFSDVDF
Query Conservation 
   

 







       

         

 
 


                       
  
 
  


 



Alig confidence 
























....



































..












Template Conservation      







 

   
  

  ....    

 
 

          

             ..       
 



Template Sequence  IPDNKITVVGVGQVGMACAISILGK. . . . SLTDELALVDVLEDKLKGEMMDLQHGSLFLQTPKIV. . ANKDYSVTANSKI
Template Known Secondary structure 

SS
S

S....S

SS

S
SGGGS



..

SSSSGGGS
S
Template Predicted Secondary structure 







....









..






Template SS confidence 















































































   18.20.........30.........40.. .......50.........60.........70........ .80.........90.
 
   81........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 
























.
Query SS confidence 














































































.
Query Sequence  VMAHIRVGKYPMRELDEKIPLRHGVVGQETCGPGGIAYGMRSIGGVLELVDYMEKYSPNAWMLNYSNPAAIVAEATRRL.
Query Conservation 




          
  
    
     
 
 

     

  
   
   
    
 
  
  




  
      .
Alig confidence 




















....................





































.
Template Conservation 



          
      ....................
  
   
   
    
 
 


 




  
      
Template Sequence  VVVTAGVRQQEGESRLNLVQR. . . . . . . . . . . . . . . . . . . . NVNVFKFIIPQIVKYSPNCIIIVVSNPVDILTYVAWKLS
Template Known Secondary structure 

TT


SSSSTT


....................TTS
SS
SSS
Template Predicted Secondary structure 









....................





Template SS confidence 















































































   94.....100.........110.... .....120.........130.........140.........150...
 
   160.......
Predicted Secondary structure  .




Query SS confidence  .







Query Sequence  . RPNAKILN
Query Conservation  .    



Alig confidence  .







Template Conservation 
 
  



Template Sequence  GLPKHRVIG
Template Known Secondary structure  S

Template Predicted Secondary structure 





Template SS confidence 








   154.....160..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions