Return to main results Retrieve Phyre Job Id

Job DescriptionP31450
Confidence99.97%DateThu Jan 5 11:47:41 GMT 2012
Rank55Aligned Residues141
% Identity13%Templated2ldxa1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.96

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  MTKFSVVVAGGGSTFTPGIVLMLLANQDRFPLRALKFYDNDGARQEVIAEACKVILKEKAPDIAFSYTTDPEVAFSDVDF
Query Conservation 
   

 







       

         

 
 


                       
  
 
  


 



Alig confidence 
























....



































..












Template Conservation 
   







 

   
  
   ....
    
 
 
           

             .. 
     
  


Template Sequence  LSRCKITVVGVGDVGMACAISILLK. . . . GLADELALVDADTDKLRGEALDLQHGSLFLSTPKIV. . FGKDYNVSANSKL
Template Known Secondary structure 





STT....TS
S
S
TTTT
S

..SSGGGGTT
Template Predicted Secondary structure 







....











..







Template SS confidence 















































































   17..20.........30.........40. ........50.........60.........70....... ..80.........90
 
   81........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 
























.
Query SS confidence 














































































.
Query Sequence  VMAHIRVGKYPMRELDEKIPLRHGVVGQETCGPGGIAYGMRSIGGVLELVDYMEKYSPNAWMLNYSNPAAIVAEATRRL.
Query Conservation 




          
  
    
     
 
 

     

  
   
   
    
 
  
  




  
      .
Alig confidence 




















....................





































.
Template Conservation 


  
        
      ....................
  
   
   
       


  


 
  
      
Template Sequence  VIITAGARMVSGQTRLDLLQR. . . . . . . . . . . . . . . . . . . . NVAIMKAIVPGVIQNSPDCKIIVVTNPVDILTYVVWKIS
Template Known Secondary structure 

S



TTT
SS
TT....................TTTSTT

SSS
Template Predicted Secondary structure 









....................





Template SS confidence 















































































   91........100.........110. ........120.........130.........140.........150
 
   160.......
Predicted Secondary structure  .




Query SS confidence  .







Query Sequence  . RPNAKILN
Query Conservation  .    



Alig confidence  .







Template Conservation 
 
  



Template Sequence  GFPVGRVIG
Template Known Secondary structure 
S
TTT
Template Predicted Secondary structure 





Template SS confidence 








   151........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions