Return to main results Retrieve Phyre Job Id

Job DescriptionP31450
Confidence96.11%DateThu Jan 5 11:47:41 GMT 2012
Rank317Aligned Residues99
% Identity23%Templated1rq2a1
SCOP infoTubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain
Resolution1.86

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70
Predicted Secondary structure 



















..............
Query SS confidence 

































































. . . . . . . . . . . . . .
Query Sequence  SVVVAGGGSTFTPGIVLMLLANQDRFPLRALKFYDNDGARQEVIAEACKVILKEKAPDIAFSYTTD. . . . . . . . . . . . . .
Query Conservation 

 







       

         

 
 


                       
  
 
..............
Alig confidence 












.








..
















...........












..............
Template Conservation   
 







 
. 
  
    ..   
  





   
 ...........   
  

 

   

     
  

 
Template Sequence  VIKVVGIGGGGVN. AVNRMIEQG. . LKGVEFIAINTDAQALL. . . . . . . . . . . MSDADVKLDVGRDSTGADPEVGRKAAE
Template Known Secondary structure 
.TT..

SS
...........


S

TTT



Template Predicted Secondary structure 

.

..






...........












Template SS confidence 















































































   10.........20.. .......30. ........40........ .50.........60.........70.....
 
   71........80.........90.........100.........110.........120.........130.........140.....
Predicted Secondary structure  .....

























Query SS confidence  . . . . .










































































Query Sequence  . . . . . PEVAFSDVDFVMAHIRVGKYPMRELDEKIPLRHGVVGQETCGPGGIAYGMRSIGGVLELVDYMEKYSPNAWMLNY
Query Conservation  .....  


 








          
  
    
     
 
 

     

  
   
   
    
 
  
  
Alig confidence  .....























...........................












....






Template Conservation       
   
   
 
 
 









...........................





  

  
.... 
 



Template Sequence  DAKDEIEELLRGADMVFVTAGEGGGTGTG. . . . . . . . . . . . . . . . . . . . . . . . . . . GAPVVASIARKLG. . . . ALTVGVV
Template Known Secondary structure  TTT
STTSS...........................T....
Template Predicted Secondary structure 












...........................

....

Template SS confidence 















































































   81........90.........100......... 110.........120.. .......
 
   146..
Predicted Secondary structure 


Query SS confidence 


Query Sequence  SNP
Query Conservation 


Alig confidence 


Template Conservation 
 
Template Sequence  TRP
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   130..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions