|   |
1 | . | . | . | |
|
|
. | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | K | F | . |
. |
. |
S | V | V | V | A | G | G | G | S | T | F | T | P | G | I | V | L | M | L | L | A | N | Q | D | R | F | P | L | R | A | L | K | F | Y | D | N | D | G | A | R | Q | E | V | I | A | E | A | C | K | V | I | L | K | E | K | A | P | D | I | A | F | S | Y | T | T | D | P | E | V | A | F | S | D |
Query Conservation |   |
|   |   |   | . | . | . |
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |   | . | . | . | . |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
M | K | N | N | G | G | A | R | V | V | V | I | G | A | G | F | V | G | A | S | Y | V | F | A | L | M | N | Q | . |
. |
. |
. |
G | I | A | D | E | I | V | L | I | D | A | N | E | S | K | A | I | G | D | A | M | D | F | N | H | G | K | V | F | A | P | K | P | V | D | I | . |
. |
W | H | G | D | Y | D | D | C | R | D |
Template Known Secondary structure |   |
| T | T | T | T | S |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | T |
|
| S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S |
|
|  |  | . | . |  |  |
|
| G | G | G | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |  |
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
. | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | F | V | M | A | H | I | R | V | G | K | Y | P | M | R | E | L | D | E | K | I | P | L | R | H | G | V | V | G | Q | E | T | C | G | P | G | G | I | A | Y | G | M | R | S | I | G | G | V | L | E | L | V | D | Y | M | E | K | Y | S | P | N | A | W | M | L | N | Y | S | N | P | A | A | I | V | A | E | A | T | R |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|
|
|
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | D | L | V | V | I | C | A | G | A | N | Q | K | P | G | E | T | R | L | D | L | V | D | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | I | A | I | F | R | S | I | V | E | S | V | M | A | S | G | F | Q | G | L | F | L | V | A | T | N | P | V | D | I | L | T | Y | A | T | W |
Template Known Secondary structure |   |
| S |  |  |  |  |
|
| S |
|
|
|
| T | T | T |
| S | G | G | G |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
158 | . | 160 | |
|
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
| . | . |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
| . |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | R | . |
. |
P | N | A | K | I | L | N | I |
Query Conservation |   |
  |   |   | . | . |   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |   |   |
|
|
|   |
Template Sequence |   |
K | F | S | G | L | P | H | E | R | V | I | G | S |
Template Known Secondary structure |   |
 |  |  | T |
|
| G | G | G |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |