Job Description P31450 Confidence 100.00% Date Thu Jan 5 11:47:41 GMT 2012 Rank 47 Aligned Residues 187 % Identity 14% Template c5mdhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure												.																			.												.	.
Query SS confidence												.																			.												.	.
Query Sequence		T	K	F	S	V	V	V	A	G	G	.	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	D	R	.	F	P	L	R	A	L	K	F	Y	D	N	.	.	D	G	A	R	Q	E	V	I	A	E	A	C	K	V	I	L	K	E	K	A	P	D	I	A	F	S	Y	T	T	D	P	E	V	A	F	S	D
Query Conservation												.																			.												.	.
Alig confidence												.																			.												.	.																.	.
Template Conservation																																																												.	.
Template Sequence		E	P	I	R	V	L	V	T	G	A	A	G	Q	I	A	Y	S	L	L	Y	S	I	G	N	G	S	V	F	G	K	D	Q	P	I	I	L	V	L	L	D	I	T	P	M	M	G	V	L	D	G	V	L	M	E	L	Q	D	C	.	.	A	L	P	L	L	K	D	V	I	A	T	D	K	E	E	I	A	F	K	D
Template Known Secondary structure										S	T	T	S	T											T	T	T	T	T		T	T											G	G	G														T	.	.			T	T								S						T	T	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		V	D	F	V	M	A	H	I	R	V	G	K	Y	P	M	R	E	L	D	E	K	I	P	L	R	H	G	V	V	G	Q	E	T	C	G	P	G	G	I	A	Y	G	M	R	S	I	G	G	V	L	E	L	V	D	Y	M	E	K	Y	S	P	N	A	W	.	M	L	N	Y	S	N	P	A	A	I	V	A	E	A	T
Query Conservation																																																																		.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	V	A	I	L	V	G	S	M	P	R	R	D	G	M	E	R	K	D	L	L	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	K	I	F	K	C	Q	G	A	A	L	D	K	Y	A	K	K	S	V	K	V	I	V	V	G	N	P	A	N	T	N	C	L	T	A
Template Known Secondary structure			S							S					S	S	S		S		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S		T	T							S	S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		157	.	.	160				.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure						.	.	.												.																										.					.	.	.
Query SS confidence						.	.	.												.																										.					.	.	.
Query Sequence		R	R	L	R	.	.	.	P	N	A	K	I	L	N	I	C	D	M	.	P	I	G	I	E	S	R	M	A	Q	I	V	G	L	Q	D	R	K	Q	M	R	V	R	Y	Y	.	G	L	N	H	.	.	.	W	W	S	A	I	S	R	S	F	R	K	G
Query Conservation						.	.	.												.																										.					.	.	.
Alig confidence						.	.	.												.															.											.		.			.	.	.
Template Conservation																																			.													.
Template Sequence		S	K	S	A	P	S	I	P	K	E	N	F	S	C	L	T	R	L	D	H	N	R	A	K	A	Q	I	A	L	K	L	G	V	.	T	S	D	D	V	K	N	V	I	I	W	G	.	N	H	S	S	T	Q	Y	P	D	V	N	H	A	K	V	K	L
Template Known Secondary structure				T		T	T	S		G	G	G																					T		.		G	G	G								B	.		S	S	T	T						T	T
Template Predicted Secondary structure																																			.													.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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