Job Description P31450 Confidence 98.69% Date Thu Jan 5 11:47:41 GMT 2012 Rank 107 Aligned Residues 122 % Identity 17% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.											.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.						.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	K	F	S	V	V	V	A	G	G	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	D	R	F	P	L	R	A	L	K	F	Y	D	N	D	G	A	.	.	.	.	R	Q	E	V	I	.	.	.	.	.	.	.	.	.	.	A	E	A	C	K	V	I	L	K	E	K	A	P	D	I	A	F	S
Query Conservation																																													.	.	.	.						.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																						.	.	.	.															.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																						.	.	.	.
Template Sequence		I	K	.	.	K	I	G	V	L	G	M	G	Y	V	G	I	P	A	A	V	L	F	A	D	A	.	.	.	.	P	C	F	E	K	V	L	G	F	Q	R	N	S	K	S	S	G	Y	K	I	E	M	L	N	R	G	E	S	P	L	K	G	E	E	P	G	L	E	E	L	I	G	K	V	V	K	A	G	K	F	E
Template Known Secondary structure				.	.								S	T	T											S	.	.	.	.	T	T												T	T	T	T	T						T	T	T				S	S			G	G	G											T	T
Template Predicted Secondary structure				.	.																						.	.	.	.
Template SS confidence
		18	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	T	D	P	E	V	A	F	S	D	V	D	F	V	M	A	H	I	R	V	G	K	Y	P	M	R	E	L	D	E	K	I	P	L	R	H	G	V	V	G	Q	E	T	C	G	P	G	G	I	A	Y	G	M	R	S	I	G	G	V	L	E	L	V	D	Y	M	E	K	Y	S	P	N	A	W	M	L	N	Y	S
Query Conservation
Alig confidence									.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	T	P	D	F	S	R	.	I	S	E	L	D	A	V	T	L	A	I	Q	T	P	F	A	N	P	K	D	L	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	S	A	L	I	D	G	I	R	N	V	G	K	Y	L	K	P	G	M	L	V	V	L	E
Template Known Secondary structure				S		G	G	G	.	G	G	G		S												S	S			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T
Template Predicted Secondary structure									.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																									.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		147	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	A	A	I	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	I	T	P	G	T
Template Known Secondary structure		S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions