Job Description P31450 Confidence 100.00% Date Thu Jan 5 11:47:41 GMT 2012 Rank 48 Aligned Residues 176 % Identity 21% Template c3fi9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		M	T	K	F	S	V	V	V	A	G	.	G	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	D	R	F	P	L	R	A	L	K	F	Y	D	N	D	G	A	R	Q	E	V	I	A	E	A	C	K	V	I	L	K	E	K	A	P	D	I	A	F	S	Y	T	T	D	P	E	V	A	F	S	D	V	D
Query Conservation												.
Alig confidence												.																.	.	.	.																											.	.	.
Template Conservation																												.	.	.	.																											.	.	.
Template Sequence		L	T	E	E	K	L	T	I	V	G	A	A	G	M	I	G	S	N	M	A	Q	T	A	A	M	M	.	.	.	.	R	L	T	P	N	L	C	L	Y	D	P	F	A	V	G	L	E	G	V	A	E	E	I	R	H	C	.	.	.	G	F	E	G	L	N	L	T	F	T	S	D	I	K	E	A	L	T	D	A	K
Template Known Secondary structure		S		S	S						S	T	T	S													T	.	.	.	.	T			S							S																.	.	.			T	T							S							T	T
Template Predicted Secondary structure																												.	.	.	.																											.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		F	V	M	A	H	I	R	V	G	K	Y	P	M	R	E	L	D	E	K	I	P	L	R	H	G	V	V	G	Q	E	T	C	G	P	G	G	I	A	Y	G	M	R	S	I	G	G	V	L	E	L	V	D	Y	M	E	K	Y	S	P	N	A	.	W	M	L	N	Y	S	N	P	A	A	I	V	A	E	A	T	R	R
Query Conservation																																																															.
Alig confidence									.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation									.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	V	S	S	G	G	.	.	.	.	.	.	.	T	R	E	D	L	L	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	E	I	A	A	Q	L	G	K	D	I	K	S	Y	C	P	D	C	K	H	V	I	I	I	F	N	P	A	D	I	T	G	L	V	T	L	I
Template Known Secondary structure									.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T								S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.								.	.	.	.	.	.	90	.																					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		159			160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure			.	.													.																					.										.	.	.
Query SS confidence			.	.													.																					.										.	.	.
Query Sequence		L	.	.	R	P	N	A	K	I	L	N	I	C	D	M	.	P	I	G	I	E	S	R	M	A	Q	I	V	G	L	Q	D	R	K	Q	M	.	R	V	R	Y	Y	G	L	N	H	.	.	.	W	W	S	A	I	S	R	S	F	R	K	G
Query Conservation			.	.													.																					.										.	.	.
Alig confidence			.	.													.															.						.							.			.	.	.
Template Conservation																																.													.
Template Sequence		Y	S	G	L	K	P	S	Q	V	T	T	L	A	G	L	D	S	T	R	L	Q	S	E	L	A	K	H	F	G	I	.	K	Q	S	L	V	T	N	T	R	T	Y	G	.	G	H	G	E	Q	M	A	V	F	A	S	T	A	K	V	N	G
Template Known Secondary structure				T			G	G	G																					T	S	.		G	G	G									.	S	S	G	G	G					G	G	G				T	T
Template Predicted Secondary structure																																.													.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions