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Job DescriptionP31450
Confidence100.00%DateThu Jan 5 11:47:41 GMT 2012
Rank30Aligned Residues175
% Identity21%Templatec2v6bB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form)
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  FSVVVAGGGSTFTPGIVLMLLANQDRFPLRALKFYDNDGARQEVIAEACKVILKEKAPDIAFSYTTDPEVAFSDVDFVMA
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Template Sequence  MKVGVVGTGFVGSTAAFALVLR. . . . GSCSELVLVDRDEDRAQAEAEDIAH. . . AAPVSHGTRVWHGGHSELADAQVVIL
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   22.......30.........40... ......50.........60........ .70.........80.........90....
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  HIRVGKYPMRELDEKIPLRHGVVGQETCGPGGIAYGMRSIGGVLELVDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNA
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Template Sequence  TAG. . . . . AESRLDLLEK. . . . . . . . . . . . . . . . . . . . NADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQ
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   164.....170. ........180.........190.........200 .........210..
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Query Sequence  KILNICDM. . PIGIESRMAQIVGLQDRKQMRVRYYGLNH. . . WWSAISRSFRKG
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Template Sequence  PVIGSGTVLDSARFRHLMAQHAGV. DGTHAHGYVLG. EHGDSEVLAWSSAMVAG
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   159160.........170.........180.. .......190... ......200.........210
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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