Job Description P31450 Confidence 93.77% Date Thu Jan 5 11:47:41 GMT 2012 Rank 414 Aligned Residues 139 % Identity 14% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		K	F	S	V	V	V	A	G	G	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	D	R	F	P	L	R	A	L	K	F	Y	D	N	D	G	A	R	Q	E	V	I	A	E	A	C	K	V	I	L	K	E	K	A	P	D	I	A	F	S	Y	T	T	D	P	E	V	A	F	S	.	.	.	.	D	V
Query Conservation																																																																												.	.	.	.
Alig confidence															.	.																															.	.	.	.	.	.																								.	.	.	.
Template Conservation															.	.																															.	.	.	.	.	.
Template Sequence		K	N	R	F	V	I	L	G	F	G	C	V	G	.	.	Q	A	L	X	P	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	.	.	.	.	.	.	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	E	N
Template Known Secondary structure			S								S				.	.											B				G	G	G						S	S			S				.	.	.	.	.	.					T										T	T	T					T	G	G	G			T	T
Template Predicted Secondary structure															.	.																															.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.
Predicted Secondary structure																																				.	.	.	.																																					.	.
Query SS confidence																																				.	.	.	.																																					.	.
Query Sequence		D	F	V	M	A	H	I	R	V	G	K	Y	P	M	R	E	L	D	E	K	I	P	L	R	H	G	V	V	G	Q	E	T	C	G	.	.	.	.	P	G	G	I	A	Y	G	M	R	S	I	G	G	V	L	E	L	V	D	Y	M	E	K	Y	S	P	N	A	W	M	L	N	Y	S	N	P	.	.	A	A	I	V
Query Conservation																																				.	.	.	.																																					.	.
Alig confidence								.	.														.													.	.	.	.										.	.	.	.	.																							.	.
Template Conservation								.	.														.																										.	.	.	.	.
Template Sequence		D	F	L	I	D	V	.	.	S	I	G	I	S	S	L	A	L	I	I	L	C	.	N	Q	K	G	A	L	Y	I	N	A	A	T	E	P	W	K	E	R	R	T	N	Y	S	L	R	.	.	.	.	.	E	E	V	L	R	L	K	D	K	T	Q	K	T	A	L	I	T	H	G	A	N	P	G	L	V	S	H	F
Template Known Secondary structure								.	.		S	S	S										.				T						S	S															.	.	.	.	.					T	T	T	T	T			S					S		B	T	T	T	B
Template Predicted Secondary structure								.	.														.																										.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		153	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	E	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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