Job Description P31450 Confidence 93.76% Date Thu Jan 5 11:47:41 GMT 2012 Rank 416 Aligned Residues 75 % Identity 20% Template c2nvuB_ PDB info PDB header:protein turnover, ligase Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	K	F	S	V	V	V	A	G	G	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	D	R	F	P	L	R	A	L	K	F	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	G	A	R	Q	E	V	I	A	E	A	C	K	V	I	L	K	E	K	A	P
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																											.	.	.	.	.																																												.	.	.	.
Template Sequence		L	D	T	C	K	V	L	V	I	G	A	G	G	L	G	C	E	L	L	K	N	L	A	L	S	.	.	.	.	.	G	F	R	Q	I	H	V	I	D	M	D	T	I	D	V	S	N	L	N	R	Q	F	L	F	R	P	K	D	I	G	R	P	K	A	E	V	A	A	E	F	L	N	D	.	.	.	.	R	V	P
Template Known Secondary structure				T									S	S											T	T	.	.	.	.	.	T											B			G	G	G	G	G	T		T	T			G	G	G	T	T	S	B												.	.	.	.		S	T
Template Predicted Secondary structure																											.	.	.	.	.																																												.	.	.	.
Template SS confidence
		2046	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070						.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.					.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		D	I	A	F	S	Y	T	T	D	P	E	V	A	.	.	.	.	.	F	S	D	V	D	F	V	M	A	H
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		N	C	N	V	V	P	H	F	N	K	I	Q	D	F	N	D	T	F	Y	R	Q	F	H	I	I	V	C	G
Template Known Secondary structure		T								S		G	G	G	S							T		S
Template Predicted Secondary structure
Template SS confidence
		2117	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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