Job Description P31450 Confidence 99.97% Date Thu Jan 5 11:47:41 GMT 2012 Rank 60 Aligned Residues 178 % Identity 12% Template c2hlpB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the e267r mutant of a halophilic2 malate dehydrogenase in the apo form Resolution 2.59 Å

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		5	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure									.																														.	.
Query SS confidence									.																														.	.
Query Sequence		S	V	V	V	A	G	G	.	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	D	R	F	P	L	R	A	L	K	F	Y	D	N	.	.	D	G	A	R	Q	E	V	I	A	E	A	C	K	V	I	L	K	E	K	A	P	D	I	A	F	S	Y	T	T	D	P	E	V	A	F	S	D	V	D	F	V
Query Conservation									.																														.	.
Alig confidence									.															.	.	.	.												.	.															.	.	.
Template Conservation																								.	.	.	.																												.	.	.
Template Sequence		K	V	S	V	V	G	A	A	G	T	V	G	A	A	A	G	Y	N	I	A	L	R	.	.	.	.	D	I	A	D	E	V	V	F	V	D	I	P	D	K	E	D	D	T	V	G	Q	A	A	D	T	N	H	.	.	.	G	I	A	Y	D	S	N	T	R	V	R	Q	G	G	Y	E	D	T	A	G	S	D	V	V
Template Known Secondary structure							T	T	T	S													T	.	.	.	.	T			S								G	G	G														.	.	.			T	T	T										G	G	G	G	T	T		S
Template Predicted Secondary structure																								.	.	.	.																												.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		M	A	H	I	R	V	G	K	Y	P	M	R	E	L	D	E	K	I	P	L	R	H	G	V	V	G	Q	E	T	C	G	P	G	G	I	A	Y	G	M	R	S	I	G	G	V	L	E	L	V	D	Y	M	E	K	Y	S	P	N	A	W	M	L	N	Y	S	N	P	A	A	I	V	A	E	A	T	R	R	L	R	.
Query Conservation																																																																																	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	T	A	G	I	P	R	Q	P	G	Q	T	R	I	D	L	A	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	P	I	M	E	D	I	Q	S	S	L	D	E	H	N	D	D	Y	I	S	L	T	T	S	N	P	V	D	L	L	N	R	H	L	Y	E	A	G	D
Template Known Secondary structure											T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T		S	S								S	S											T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
			161	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200							.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.												.	.																														.	.	.	.	.	.
Query SS confidence		.												.	.																														.	.	.	.	.	.
Query Sequence		.	P	N	A	K	I	L	N	I	C	D	M	.	.	P	I	G	I	E	S	R	M	A	Q	I	V	G	L	Q	D	R	K	Q	M	R	V	R	Y	Y	G	L	N	H	.	.	.	.	.	.	W	W	S	A	I	S	R	S	F	R	K
Query Conservation		.												.	.																														.	.	.	.	.	.
Alig confidence		.												.	.															.												.			.	.	.	.	.	.
Template Conservation																														.												.
Template Sequence		R	S	R	E	Q	V	I	G	F	G	G	R	L	D	S	A	R	F	R	Y	V	L	S	E	E	F	D	A	.	P	V	Q	N	V	E	G	T	I	L	G	.	E	H	G	D	A	Q	V	P	V	F	S	K	V	R	V	D	G	T	D
Template Known Secondary structure		S		T	T	T																						T		.		G	G	G								.		S	S	T	T					G	G	G				T	T	B
Template Predicted Secondary structure																														.												.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions