Job Description P31450 Confidence 100.00% Date Thu Jan 5 11:47:41 GMT 2012 Rank 21 Aligned Residues 184 % Identity 17% Template c2fnzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of the lactate dehydrogenase from cryptosporidium2 parvum complexed with cofactor (b-nicotinamide adenine dinucleotide)3 and inhibitor (oxamic acid) Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	K	F	S	V	V	V	A	G	G	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	D	R	F	P	L	R	A	L	K	F	Y	D	N	D	G	A	R	Q	E	V	I	A	E	A	C	K	V	I	L	K	E	K	A	P	D	I	A	F	S	Y	T	T	D	P	E	V	A	F	S	D	V	D	F
Query Conservation
Alig confidence																											.	.	.	.	.																																												.
Template Conservation																											.	.	.	.	.																																												.
Template Sequence		I	E	R	R	K	I	A	V	I	G	S	G	Q	I	G	G	N	I	A	Y	I	V	G	K	D	.	.	.	.	.	N	L	A	D	V	V	L	F	D	I	A	E	G	I	P	Q	G	K	A	L	D	I	T	H	S	M	V	M	F	G	S	T	S	K	V	I	G	T	N	D	Y	A	D	.	I	S	G	S	D	V
Template Known Secondary structure													S														.	.	.	.	.	T		S							S	S	S	S																	T											G	G	G	.	G	T	T		S
Template Predicted Secondary structure																											.	.	.	.	.																																												.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	M	A	H	I	R	V	G	K	Y	P	M	R	E	L	D	E	K	I	P	L	R	H	G	V	V	G	Q	E	T	C	G	P	G	G	I	A	Y	G	M	R	S	I	G	G	V	L	E	L	V	D	Y	M	E	K	Y	S	P	N	A	W	M	L	N	Y	S	N	P	A	A	I	V	A	E	A	T	R	R	L	.
Query Conservation																																																																																	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	I	T	A	S	I	P	G	R	P	K	D	D	R	S	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	N	A	R	I	L	D	S	V	A	E	G	V	K	K	Y	C	P	N	A	F	V	I	C	I	T	N	P	L	D	V	M	V	S	H	F	Q	K	V	S
Template Known Secondary structure									S	S			S	S		G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T	S							S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
			160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.													.	.																														.	.	.
Query SS confidence		.													.	.																														.	.	.
Query Sequence		.	R	P	N	A	K	I	L	N	I	C	D	M	.	.	P	I	G	I	E	S	R	M	A	Q	I	V	G	L	Q	D	R	K	Q	M	R	V	R	Y	Y	G	L	N	H	.	.	.	W	W	S	A	I	S	R	S	F	R	K	G
Query Conservation		.													.	.																														.	.	.
Alig confidence		.													.	.															.												.			.	.	.
Template Conservation																															.												.
Template Sequence		G	L	P	H	N	K	V	C	G	M	A	G	V	L	D	S	S	R	F	R	T	F	I	A	Q	H	F	G	V	.	N	A	S	D	V	S	A	N	V	I	G	.	G	H	G	D	G	M	V	P	A	T	S	S	V	S	V	G	G
Template Known Secondary structure					G	G	G																						T		.		G	G	G						B	B	.		S	S	T	T		B			G	G	G				T	T
Template Predicted Secondary structure																															.												.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions