Job Description P31450 Confidence 100.00% Date Thu Jan 5 11:47:41 GMT 2012 Rank 43 Aligned Residues 167 % Identity 20% Template c2dfdD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of human malate dehydrogenase type 2 Resolution 1.90 Å

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		5	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		S	V	V	V	A	G	G	.	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	D	R	F	P	L	R	A	L	K	F	Y	D	N	D	G	A	R	Q	E	V	I	A	E	A	C	K	V	I	L	K	E	K	A	P	D	I	A	F	S	Y	T	T	D	P	E	V	A	F	S	D	V	D	F	V	M	A
Query Conservation									.
Alig confidence									.															.	.	.	.														.	.																						.
Template Conservation																								.	.	.	.														.	.																						.
Template Sequence		K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	N	S	.	.	.	.	P	L	V	S	R	L	T	L	Y	D	I	A	H	.	.	T	P	G	V	A	A	D	L	S	H	I	E	T	K	A	A	V	K	G	Y	L	.	G	P	E	Q	L	P	D	C	L	K	G	C	D	V	V	V	I
Template Known Secondary structure							T	T	T	S	T	T												.	.	.	.	T	T									S	S	S	.	.									T	T	S	S	S	S								.	S	G	G	G						T	T		S
Template Predicted Secondary structure																								.	.	.	.														.	.																						.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		H	I	R	V	G	K	Y	P	M	R	E	L	D	E	K	I	P	L	R	H	G	V	V	G	Q	E	T	C	G	P	G	G	I	A	Y	G	M	R	S	I	G	G	V	L	E	L	V	D	Y	M	E	K	Y	S	P	N	A	W	M	L	N	Y	S	N	P	A	A	I	V	A	E	A	T	R	R	L	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	T	I	V	A	T	L	T	A	A	C	A	Q	H	C	P	E	A	M	I	C	V	I	A	N	P	V	N	S	T	I	P	I	T	A	E	V	F	K	K	H
Template Known Secondary structure				S					T	T			G	G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S						S	S																T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
				160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.													.
Query SS confidence		.	.													.
Query Sequence		.	.	R	P	N	A	K	I	L	N	I	C	D	M	.	P	I	G	I	E	S	R	M	A	Q	I	V	G	L	Q	D	R	K	Q	M	R	V	R	Y	Y	G	L	N	H
Query Conservation		.	.													.
Alig confidence		.	.													.															.												.
Template Conservation																															.												.
Template Sequence		G	V	Y	N	P	N	K	I	F	G	V	T	T	L	D	I	V	R	A	N	T	F	V	A	E	L	K	G	L	.	D	P	A	R	V	N	V	P	V	I	G	.	G	H
Template Known Secondary structure		T				T	T	S																					T		.		G	G	G		B						.		S
Template Predicted Secondary structure																															.												.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180		.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions