Job Description P31450 Confidence 100.00% Date Thu Jan 5 11:47:41 GMT 2012 Rank 41 Aligned Residues 189 % Identity 17% Template c1wziA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for alteration of cofactor specificity of2 malate dehydrogenase from thermus flavus Resolution 2.00 Å

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		1	.	.		.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure					.									.																	.	.	.
Query SS confidence					.									.																	.	.	.
Query Sequence		M	T	K	.	F	S	V	V	V	A	G	G	.	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	.	.	.	D	R	F	P	L	R	A	L	K	F	Y	D	N	D	G	A	R	Q	E	V	I	A	E	A	C	K	V	I	L	K	E	K	A	P	D	I	A	F	S	Y	T	T	D	P	E	V	A	F
Query Conservation					.									.																	.	.	.
Alig confidence					.									.																	.	.	.																													.	.
Template Conservation																																																														.	.
Template Sequence		M	K	A	P	V	R	V	A	V	T	G	A	A	G	Q	I	G	Y	S	L	L	F	R	I	A	A	G	E	M	L	G	K	D	Q	P	V	I	L	Q	L	L	G	S	E	R	S	F	Q	A	L	E	G	V	V	M	E	L	E	D	C	.	.	A	F	P	L	L	A	G	L	E	A	T	D	D	P	K	V	A	F
Template Known Secondary structure											S	S	T	T	S												T	T	T	T	T		T	T											T	T	T													T	T	.	.	T		T	T								S						T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		S	D	V	D	F	V	M	A	H	I	R	V	G	K	Y	P	M	R	E	L	D	E	K	I	P	L	R	H	G	V	V	G	Q	E	T	C	G	P	G	G	I	A	Y	G	M	R	S	I	G	G	V	L	E	L	V	D	Y	M	E	K	Y	S	.	P	N	A	W	M	L	N	Y	S	N	P	A	A	I	V	A	E
Query Conservation																																																																.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	A	D	Y	A	L	L	V	G	A	A	P	R	K	A	G	M	E	R	R	D	L	L	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	K	I	F	T	E	Q	G	R	A	L	A	E	V	A	K	K	D	V	K	V	L	V	V	G	N	P	A	N	T	N	A	L
Template Known Secondary structure		T	T		S												S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S		T	T							S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		155	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure								.	.												.	.																														.	.	.
Query SS confidence								.	.												.	.																														.	.	.
Query Sequence		A	T	R	R	L	R	.	.	P	N	A	K	I	L	N	I	C	D	M	.	.	P	I	G	I	E	S	R	M	A	Q	I	V	G	L	Q	D	R	K	Q	M	R	V	R	Y	Y	G	L	N	H	.	.	.	W	W	S	A	I	S	R	S	F	R	K	G
Query Conservation								.	.												.	.																														.	.	.
Alig confidence								.	.												.	.															.															.	.	.
Template Conservation																																					.
Template Sequence		I	A	Y	K	N	A	P	G	L	N	P	R	N	F	T	A	M	T	R	L	D	H	N	R	A	K	A	Q	L	A	K	K	T	G	T	.	G	V	D	R	I	R	R	M	T	V	W	G	N	H	S	S	T	M	F	P	D	L	F	H	A	E	V	D	G
Template Known Secondary structure						T		T	T	S		G	G	G																					T	S	.		G	G	G								B		S	S	T	T						S	S				T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions