Return to main results Retrieve Phyre Job Id

Job DescriptionP31450
Confidence98.81%DateThu Jan 5 11:47:41 GMT 2012
Rank100Aligned Residues102
% Identity18%Templatec1txgA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: structure of glycerol-3-phosphate dehydrogenase from archaeoglobus2 fulgidus
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30........ .40.........50.........60.. .......70.........80
Predicted Secondary structure 










..





.






Query SS confidence 


































. .























.

















Query Sequence  FSVVVAGGGSTFTPGIVLMLLANQDRFPLRALKFY. . DNDGARQEVIAEACKVILKEKAPD. IAFSYTTDPEVAFSDVDF
Query Conservation   

 







       

         

 
 ..


                     .  
  
 
  


 



Alig confidence 





















......






..























.

















Template Conservation 


 




  
   
  
   ......
  


  
         
                      
       


Template Sequence  MIVSILGAGAMGSALSVPLVDN. . . . . . GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEV
Template Known Secondary structure 
S

......



GGGTT

BTTTTB


S
GGGTT
S
Template Predicted Secondary structure 




......


























Template SS confidence 















































































   1........10.........20.. .......30.........40.........50.........60.........70....
 
   81........90.........100.........110.........120.........130.........140.......
Predicted Secondary structure 























Query SS confidence 


































































Query Sequence  VMAHIRVGKYPMRELDEKIPLRHGVVGQETCGPGGIAYGMRSIGGVLELVDYMEKYSPNAWMLNYSN
Query Conservation 




          
  
    
     
 
 

     

  
   
   
    
 
  
  

Alig confidence 




....................................

























Template Conservation 


 
....................................           
   
    

   
Template Sequence  VLLGV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . STDGVLPVMSRILPYLKDQYIVLISK
Template Known Secondary structure 
S....................................
GGGTTT

S



Template Predicted Secondary structure  ....................................






Template SS confidence 


































































   75.... 80.........90.........100.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions