Job Description P31450 Confidence 100.00% Date Thu Jan 5 11:47:41 GMT 2012 Rank 39 Aligned Residues 178 % Identity 21% Template c1sevA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase, glyoxysomal precursor; PDBTitle: mature and translocatable forms of glyoxysomal malate2 dehydrogenase have different activities and stabilities3 but similar crystal structures Resolution 2.55 Å

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		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		F	S	V	V	V	A	G	.	G	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	D	R	F	P	L	R	A	L	K	F	Y	D	N	D	G	A	R	Q	E	V	I	A	E	A	C	K	V	I	L	K	E	K	A	P	D	I	A	F	S	Y	T	T	D	P	E	V	A	F	S	D	V	D	F	V	M
Query Conservation									.
Alig confidence									.																.	.	.	.														.	.																			.
Template Conservation																									.	.	.	.														.	.																			.
Template Sequence		F	K	V	A	I	L	G	A	A	G	G	I	G	Q	P	L	A	M	L	M	K	M	N	.	.	.	.	P	L	V	S	V	L	H	L	Y	D	V	V	N	.	.	A	P	G	V	T	A	D	I	S	H	M	D	T	G	A	V	V	R	.	G	F	L	G	Q	Q	Q	L	E	A	A	L	T	G	M	D	L	I	I
Template Known Secondary structure								T	T	T	S	T	T										T		.	.	.	.	T	T									S	S	S	.	.										T			S	S					.				S									T	T		S
Template Predicted Secondary structure																									.	.	.	.														.	.																			.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	H	I	R	V	G	K	Y	P	M	R	E	L	D	E	K	I	P	L	R	H	G	V	V	G	Q	E	T	C	G	P	G	G	I	A	Y	G	M	R	S	I	G	G	V	L	E	L	V	D	Y	M	E	K	Y	S	P	N	A	W	M	L	N	Y	S	N	P	A	A	I	V	A	E	A	T	R	R	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	G	I	V	K	T	L	C	E	G	I	A	K	C	C	P	R	A	I	V	N	L	I	S	N	P	V	N	S	T	V	P	I	A	A	E	V	F	K	K
Template Known Secondary structure										T	T			S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S							S															T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
					160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200								.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure		.	.	.													.																														.	.	.	.	.	.	.
Query SS confidence		.	.	.													.																														.	.	.	.	.	.	.
Query Sequence		.	.	.	R	P	N	A	K	I	L	N	I	C	D	M	.	P	I	G	I	E	S	R	M	A	Q	I	V	G	L	Q	D	R	K	Q	M	R	V	R	Y	Y	G	L	N	H	.	.	.	.	.	.	.	W	W	S	A	I	S	R	S	F	R
Query Conservation		.	.	.													.																														.	.	.	.	.	.	.
Alig confidence		.	.	.													.															.												.			.	.	.	.	.	.	.
Template Conservation																																.												.
Template Sequence		A	G	T	Y	D	P	K	R	L	L	G	V	T	M	L	D	V	V	R	A	N	T	F	V	A	E	V	L	G	L	.	D	P	R	D	V	D	V	P	V	V	G	.	G	H	A	G	V	T	I	L	P	L	L	S	Q	V	K	P	P	S	S
Template Known Secondary structure		T	T				T	T	S																				T	T		.		G	G	G		B						.		S	S	G	G	G					G	G	G		B	S
Template Predicted Secondary structure																																.												.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions