 |
Job Description | P31450 | Confidence | 94.29% | Date | Thu Jan 5 11:47:41 GMT 2012 |
Rank | 407 | Aligned Residues | 65 |
% Identity | 17% | Template | c1keeH_ |
PDB info |
PDB header:ligase | Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; |
PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin
|
Resolution | 2.10 Å |
|
 |
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | Y | M | E | K | Y | S | P | N | A | W | M | L | . |
. |
. |
. |
. |
N | Y | S | N | P | A | A | I | V | A | E | A | T | R | R | L | R | P | N | A | K | I | L | N | I | C | D | M | P | I | G | I | E | S | R | M | A | Q | I | V | G | L | Q | D | R | K | Q | M | R | V | R | Y | Y | G | L | N | H |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|   |
|   |   |
| . | . | . | . | . |   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
| . |
|
| . | . | . | . |
|
|
|
|   |
|
|
|
| . |   |
|   |
|
|   |   |
|
|   |
|   |
|   |
Template Sequence |   |
A | E | D | V | L | K | M | N | P | D | G | I | F | L | S | N | G | P | G | D | P | A | P | C | D | Y | A | I | T | A | I | Q | K | F | L | E | T | D | I | P | V | F | G | I | L | . |
G | H | . |
. |
. |
. |
Q | L | L | A | L | A | S | G | A | . |
K | T | V | K | M | K | F | G | H | H | G | G | N | H |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|
| S |  |  |  |  |
|
|
| S | B |
| S | T | T |
|  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
|  |  |  |
|
| . |  |  | . | . | . | . |  |  |  |  |  |  |  | T |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |  |  | . | . | . | . |  |  |  |  |  |  |
|
|
| . |  |  |  |  |
|
|
|
|  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
270 | . | |
|
|
|
. | . | . | . | . | . | . | . | 280 | |
. | . | . | . | . | . | . | . | . | 290 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|