Return to main results Retrieve Phyre Job Id

Job DescriptionP31450
Confidence97.73%DateThu Jan 5 11:47:41 GMT 2012
Rank166Aligned Residues104
% Identity17%Templatec1gpjA_
PDB info PDB header:reductaseChain: A: PDB Molecule:glutamyl-trna reductase; PDBTitle: glutamyl-trna reductase from methanopyrus kandleri
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  MTKFSVVVAGGGSTFTPGIVLMLLANQDRFPLRALKFYDNDGARQEVIAEACKVILKEKAPDIAFSYTTDPEVAFSDVDF
Query Conservation 
   

 







       

         

 
 


                       
  
 
  


 



Alig confidence 
























.....





















.........


















Template Conservation 
  
 






 

 
 
  
   .....
   
 
 


  

  

   .........
        
   
  


Template Sequence  LHDKTVLVVGAGEMGKTVAKSLVDR. . . . . GVRAVLVANRTYERAVELARDL. . . . . . . . . GGEAVRFDELVDHLARSDV
Template Known Secondary structure 
TT
S

.....

S
SS.........T


GGGT
S
Template Predicted Secondary structure 







.....





.........



Template SS confidence 















































































   165....170.........180......... 190.........200.........210. ........220.........230
 
   81........90.........100.........110.........120.........130.........140 .........150.
Predicted Secondary structure 





















...


Query SS confidence 



























































. . .










Query Sequence  VMAHIRVGKYPMRELDEKIPLRHGVVGQETCGPGGIAYGMRSIGGVLELVDYMEKYSPNA. . . WMLNYSNPAAI
Query Conservation 




          
  
    
     
 
 

     

  
   
   
    
 
...  
  




 
Alig confidence 







.................................


















...










Template Conservation 




 
 .................................  

  
 
              









Template Sequence  VVSATAAP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HPVIHVDDVREALRKRDRRSPILIIDIANPRDV
Template Known Secondary structure 

SSS.................................S

B

SS




SS
SB
Template Predicted Secondary structure 




.................................

















Template SS confidence 









































































   231....... .240.........250.........260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions