Job Description P31450 Confidence 100.00% Date Thu Jan 5 11:47:41 GMT 2012 Rank 37 Aligned Residues 185 % Identity 17% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		4	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure										.																			.																	.	.	.	.
Query SS confidence										.																			.																	.	.	.	.
Query Sequence		F	S	V	V	V	A	G	G	.	G	S	T	F	T	P	G	I	V	L	M	L	L	A	N	Q	D	R	.	F	P	L	R	A	L	K	F	Y	D	N	D	G	A	R	Q	.	.	.	.	E	V	I	A	E	A	C	K	V	I	L	K	E	K	A	P	D	I	A	F	S	Y	T	T	D	P	E	V	A	F	S	D
Query Conservation										.																			.																	.	.	.	.
Alig confidence										.																			.																	.	.	.	.											.	.
Template Conservation																																																												.	.
Template Sequence		M	R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	.	.	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T	A	F	K	D
Template Known Secondary structure								S	T	T	S												T	T	T	T	T		T	T											S																	T	T	.	.	T		T	T								S						T	T	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		V	D	F	V	M	A	H	I	R	V	G	K	Y	P	M	R	E	L	D	E	K	I	P	L	R	H	G	V	V	G	Q	E	T	C	G	P	G	G	I	A	Y	G	M	R	S	I	G	G	V	L	E	L	V	D	Y	M	E	K	Y	S	.	P	N	A	W	M	L	N	Y	S	N	P	A	A	I	V	A	E	A	T
Query Conservation																																																														.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	V	A	L	L	V	G	A	R	P	R	G	P	G	M	E	R	K	D	L	L	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N	P	A	N	T	N	A	Y	I	A
Template Known Secondary structure			S												T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S		T	T							S	S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		157	.	.	160			.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure						.	.												.	.																						.									.	.	.
Query SS confidence						.	.												.	.																						.									.	.	.
Query Sequence		R	R	L	R	.	.	P	N	A	K	I	L	N	I	C	D	M	.	.	P	I	G	I	E	S	R	M	A	Q	I	V	G	L	Q	D	R	K	Q	M	R	.	V	R	Y	Y	G	L	N	H	.	.	.	W	W	S	A	I	S	R	S	F	R	K	G
Query Conservation						.	.												.	.																						.									.	.	.
Alig confidence						.	.												.	.															.							.						.			.	.	.
Template Conservation																																			.													.
Template Sequence		M	K	S	A	P	S	L	P	A	K	N	F	T	A	M	L	R	L	D	H	N	R	A	L	S	Q	I	A	A	K	T	G	K	.	P	V	S	S	I	E	K	L	F	V	W	G	.	N	H	S	P	T	M	Y	A	D	Y	R	Y	A	Q	I	D	G
Template Known Secondary structure				T		T	T	S		G	G	G																					T		.		G	G	G			S					B	.		S	S	T	T						S	S				T	T
Template Predicted Secondary structure																																			.													.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions