Job Description P0AAI9 Confidence 100.00% Date Thu Jan 5 11:13:02 GMT 2012 Rank 23 Aligned Residues 291 % Identity 24% Template c2vkzH_ PDB info PDB header:transferase Chain: H: PDB Molecule:fatty acid synthase subunit beta; PDBTitle: structure of the cerulenin-inhibited fungal fatty acid2 synthase type i multienzyme complex Resolution 4.0 Å

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		3	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40																	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.
Predicted Secondary structure														.	.													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence														.	.													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		Q	F	A	F	V	F	P	G	Q	G	S	Q	.	.	T	V	G	M	L	A	D	M	A	A	S	Y	.	P	I	V	E	E	T	F	A	E	A	S	A	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	D	L	W	A	L	T	Q	Q	G	P	A	.	.	.	.	E	E	L	N	K	T
Query Conservation														.	.													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence														.	.													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		Q	L	V	A	I	F	G	G	Q	G	N	T	D	D	Y	F	E	E	L	R	D	L	Y	Q	T	Y	H	V	L	V	G	D	L	I	K	F	S	A	E	T	L	S	E	L	I	R	T	T	L	D	A	E	K	V	F	T	Q	G	L	N	I	L	E	W	L	E	N	P	S	N	T	P	D	K	D	Y	L	L	S	I
Template Known Secondary structure										T	T	S		S													T																						S	S	S						T	T											G	G	G									S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		W	Q	T	Q	P	A	L	L	T	A	S	V	A	L	Y	R	V	W	Q	Q	Q	G	G	K	A	P	A	M	M	.	.	.	.	.	.	.	A	G	H	S	L	G	E	Y	S	A	L	V	C	A	G	V	I	D	F	A	.	.	.	.	.	.	.	D	A	V	R	L	V	E	M	R	G	K	F	M	Q	E	A	V
Query Conservation																															.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	S	C	P	L	I	G	V	I	Q	L	A	H	Y	V	V	T	A	K	L	L	G	F	T	P	G	E	L	R	S	Y	L	K	G	A	T	G	H	S	Q	G	L	V	T	A	V	A	I	A	E	T	D	S	W	E	S	F	F	V	S	V	R	K	A	I	T	V	L	F	F	I	G	V	R	C	Y	E	A	Y
Template Known Secondary structure																								T									T							S	T	T										T																													S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		126	.																		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	G	A	M	A	A	I	I	G	L	D	D	A	S	I	A	K	A	C	E	E	A	.	.	.	.	A	E	G	Q	V	V	S	P	V	N	F	N	S	P	G	Q	V	V	I	A	G	H	K	E	A	V	E	R	A	G	A	A	C	K
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		P	N	T	S	L	P	P	S	I	L	E	D	S	L	E	N	N	E	G	V	P	S	P	M	L	S	I	S	N	L	T	Q	E	Q	V	Q	D	Y	V	N	K	T	N	S	H	L	P	A	G	K	Q	V	E	I	S	L	V	N	G	A	K	N	L	V	V	S	G	P	P	Q	S	L	Y	G	L	N	L	T	L	R
Template Known Secondary structure																	T	T			S			S						S	S															T	S		G	G	G									S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		185	.	.																		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.																			.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.																			.	.
Query Sequence		A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	R	A	L	P	L	P	V	S	V	P	S	H	C	A	L	M	K	P	A	A	D	K	L	A	V	E	L	A	K	I	T	.	.	.	.	F	N	A	P	T	V	P	V	V	N	N	V	D	V	K	C	E	T	.	.	N	G	D
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.																			.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.																			.	.
Template Conservation
Template Sequence		K	A	K	A	P	S	G	L	D	Q	S	R	I	P	F	S	E	R	K	L	K	F	S	N	R	F	L	P	V	A	S	P	F	H	S	H	L	L	V	P	A	S	D	L	I	N	K	D	L	V	K	N	N	V	S	F	N	A	K	D	I	Q	I	P	V	Y	D	T	F	D	G	S	D	L	R	V	L	S	G	S
Template Known Secondary structure				S			T	T				T	T	S		G	G	G											S		S	S		T	T	S	T	T	T													S	S	S					T	T	T			S		B	B		T	T	T		S	B	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		A	I	R	D	A	L	V	R	Q	L	Y	N	P	V	Q	W	T	K	S	V	E	Y	M	A	A	Q	G	V	E	H	L	Y	E	V	G	P	G	K	V	.	.	L	T	G	L	T	K	R	I	V	D	T	L	T	A	S	A	L
Query Conservation																																									.	.
Alig confidence																							.	.	.	.															.	.
Template Conservation																							.	.	.	.
Template Sequence		I	S	E	R	I	V	D	C	I	I	R	L	P	V	K	W	E	T	T	T	Q	.	.	.	.	F	K	A	T	H	I	L	D	F	G	P	G	G	A	S	G	L	G	V	L	T	H	R	N	K	D	G	T	G	V	R	V	I
Template Known Secondary structure												T	S		B						T		.	.	.	.				S						S	S	S	G	G	G	S										T	T	B	S
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.					.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions