 |
Job Description | Q46810 | Confidence | 98.53% | Date | Thu Jan 5 12:34:38 GMT 2012 |
Rank | 67 | Aligned Residues | 91 |
% Identity | 13% | Template | d2icya2 |
SCOP info | Nucleotide-diphospho-sugar transferases
| Nucleotide-diphospho-sugar transferases
| UDP-glucose pyrophosphorylase
|
Resolution | 1.64 |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
20 | . | . | . | . | . | . | |
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | I | D | C | I | I | T | A | A | G | L | S | S | R | M | G | Q | . |
. |
W | K | M | M | L | P | W | . |
E | Q | G | T | I | L | D | T | S | I | K | N | A | L | Q | F | C | S | R | I | I | L | V | T | G | Y | R | G | N | E | L | H | E | R | Y | A | N | Q | S | N | I | T | I | I | H | N | P | D | Y | A | Q | G |
Query Conservation |   |
  |   |
|   |
|
|
|
|
|
|
|   |
|   |
|
|
|   | . | . |   |
|   |
|
|   |
| . |   |
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|
|   |   |   |
|
|
|   |
|   |
|   |   |   |   |
|
|
|   |
|   |   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |   |
|   |   |
Template Sequence |   |
D | K | L | V | V | L | K | L | N | G | G | L | G | T | T | M | G | C | T | G | P | K | S | V | I | E | V | R | D | G | L | T | F | L | D | L | I | V | I | Q | I | E | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | N | N | K | Y | G | C | K | V | P | L | V | L | M | N | S | F | N | T | H | D |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |
|
| B | S | G | G | G | T |
|
| S | B | G | G | G | S |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | S |
|
|
|
|  |  |  |  |  |
| T | T | T |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | T | S | V | K | A | A | V | P | A | V | Q | T | E | H | C | F | L | T | H | G | D | M | P | T | L | T | I | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |
Template Sequence |   |
D | T | H | K | I | V | E | K | Y | T | N | S | N | V | D | I | H | T | F | N | Q | S | K | Y | P | R | V | V | A | D |
Template Known Secondary structure |   |
 |  |  |  |  |  | G | G | G | T | T | S | S | S |
|  |  |  |  |  |
|
|
|  |  |
|  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|