Job Description Q46810 Confidence 99.81% Date Thu Jan 5 12:34:38 GMT 2012 Rank 52 Aligned Residues 184 % Identity 13% Template d2cu2a2 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases mannose-1-phosphate guanylyl transferase Resolution 2.20

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.							20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																					.	.	.	.	.	.										.														.
Query SS confidence																					.	.	.	.	.	.										.														.
Query Sequence		M	S	A	I	D	C	I	I	T	A	A	G	L	S	S	R	M	G	Q	.	.	.	.	.	.	W	K	M	M	L	P	W	E	Q	.	G	T	I	L	D	T	S	I	K	N	A	L	Q	.	F	C	S	R	I	I	L	V	T	G	Y	R	G	N	E	L	H	E	R	Y	A	N	Q	S	N	I	T	I	I	H	N
Query Conservation																					.	.	.	.	.	.										.														.
Alig confidence					.																.	.	.	.	.	.										.														.
Template Conservation					.
Template Sequence		M	K	T	.	Y	A	L	V	M	A	G	G	R	G	E	R	L	W	P	L	S	R	E	D	R	P	K	P	F	L	P	L	F	E	G	K	T	L	L	E	A	T	L	E	R	L	A	P	L	V	P	P	E	R	T	L	L	A	V	R	R	D	Q	E	A	V	A	R	P	Y	A	D	G	I	R	L	L	L	E	P
Template Known Secondary structure					.											G	G	G	T	T	T		B	T	T	B		G	G	G		B		G	G	G		B										T	T	T	S		G	G	G							G	G	G					G	G	G		S	S	S						S
Template Predicted Secondary structure					.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure													.																								.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																								.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	Y	A	Q	G	L	L	T	S	V	.	K	A	A	V	P	A	V	Q	T	E	H	C	F	L	T	H	G	D	M	P	T	L	T	.	.	.	.	I	D	I	F	R	K	I	W	S	L	R	N	D	G	A	I	L	P	L	H	N	G	I	P	G	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.																								.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																								.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	R	D	T	A	G	A	V	L	L	G	V	A	E	A	L	K	E	G	A	E	R	L	L	V	L	P	A	D	H	Y	V	G	D	D	E	A	Y	R	E	A	L	A	T	M	L	E	A	A	E	E	G	F	V	V	A	L	G	L	R	P	T	R	P	E	T	E	Y	G	Y	I	R	L	G	P	R	E	G	A
Template Known Secondary structure		S																			T		S							S	S				S																		T	T										S	S			S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
																																134	.	.	.	.	.	140	.													.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	V	S	K	P	C	L	.	.	.	.	.	.	.	.	.	.	.	.	M	Q	A	I	Q	R	P	N	V	T	N	M	R	Q	A	L	L	M	G	D	H	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	Y	R	G	E	G	F	V	E	K	P	S	Y	A	E	A	L	E	Y	I	R	K	G	Y	V	W	N	G	G	V	F	A	F	A	P	A	T	M	A	E	L	F	R	R	H	L	P	S	H	H	E	A	L	E	R	L	L	A	G	A	S	L	E	E	V	Y	A	G	L	P	K	I	S	I	D	Y	G	V	M	E
Template Known Secondary structure																							T	T																																			T	T									T	S									T	G	G
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
					163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	Y	S	V	E	I	E	N	A	E	I	I	L	D	I	D	T	P	D	D	F	I	T	A
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		K	A	E	R	V	R	V	V	L	G	R	F	P	W	D	D	V	G	N	W	R	A	L	E	R	V
Template Known Secondary structure		G		S	S								S							S	T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions