Job Description Q46810 Confidence 99.88% Date Thu Jan 5 12:34:38 GMT 2012 Rank 42 Aligned Residues 185 % Identity 19% Template d1tzfa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.10

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																																												.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	A	I	D	C	I	I	T	A	A	G	L	S	S	R	M	G	Q	W	K	M	M	L	P	W	E	Q	G	T	I	L	D	T	S	I	K	N	A	L	Q	F	.	C	S	R	I	I	L	V	T	G	Y	R	G	N	E	L	H	E	R	Y	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.													.	.	.																								.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.													.	.	.
Template Sequence		M	A	S	.	K	A	V	I	L	A	G	G	L	G	V	K	.	.	.	P	K	P	M	V	E	I	G	G	K	P	I	L	W	H	I	M	K	M	Y	S	V	H	G	I	K	D	F	I	I	C	C	G	Y	K	G	Y	V	I	K	E	Y	F	A	N	Y	F	L	H	M	S	D	V	T	F	H	M	A	E	N	R
Template Known Secondary structure					.								S					.	.	.		G	G	G				T	T														T	T										T	T										T						S						G	G	G	T
Template Predicted Secondary structure					.													.	.	.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
										64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.	.	.	.	.	.	.																													.														.																											.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																													.														.																											.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Q	S	N	I	T	I	I	H	N	P	D	Y	A	Q	G	L	L	T	S	V	K	A	A	V	P	A	V	Q	.	T	E	H	C	F	L	T	H	G	D	M	P	T	.	L	T	I	D	I	F	R	K	I	W	S	L	R	N	D	G	A	I	L	P	L	H	N	G	I	P	.	.	.
Query Conservation		.	.	.	.	.	.	.	.																													.														.																											.	.	.
Alig confidence		.	.	.	.	.	.	.	.																													.														.																											.	.	.
Template Conservation
Template Sequence		M	E	V	H	H	K	R	V	E	P	W	N	V	T	L	V	D	T	G	D	S	S	M	T	G	G	R	L	K	R	V	A	E	Y	V	K	D	D	E	A	F	L	F	T	Y	G	D	G	V	A	D	L	D	I	K	A	T	I	D	F	H	K	A	H	G	K	K	A	T	L	T	A	T	F	P	P	G	R	F	G
Template Known Secondary structure					T	T															S	S										T	G	G	G	T	T	T	S	S							T	T																				S												S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
																										131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	P	I	L	V	S	K	P	C	L	M	Q	A	I	Q	R	.	.	.	P	N	V	T	N	M	R	Q	A	L	L	M	G	D	H	Y	S	V	E	I	E	N	A	E	I	I	L	D	I	D	T	P	D	D	F	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																								.	.
Template Conservation																																																																					.	.
Template Sequence		A	L	D	I	Q	A	G	Q	V	R	S	F	Q	E	K	P	K	G	D	G	A	M	I	N	G	G	F	F	V	L	N	P	S	V	I	D	L	I	D	N	D	A	T	T	W	E	Q	E	P	L	M	T	L	A	Q	Q	G	E	L	M	A	F	E	H	P	G	F	.	.	W	Q	P	M	D	T	L	R	D	K	V
Template Known Secondary structure							T	T								S		S			S												G	G	G	G	G	G			S	T	T			T	T	T									T	T									S		.	.						S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.
		184	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	K	E	R	Y	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	E	G	L	W	E	K
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions