Job Description Q46810 Confidence 99.89% Date Thu Jan 5 12:34:38 GMT 2012 Rank 41 Aligned Residues 168 % Identity 13% Template c3okrC_ PDB info PDB header:transferase Chain: C: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd) Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	D	C	I	I	T	A	A	G	L	S	S	R	M	G	Q	W	K	M	M	L	P	W	E	Q	G	T	I	L	D	T	S	I	K	N	A	L	Q	F	C	S	R	I	I	L	V	T	G	Y	R	G	N	E	L	H	E	R	Y	A	N	Q	S	N	I	T	I	I	H	N	P	D	Y	A	Q	G	L	L	T	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Template Sequence		E	V	V	A	I	V	P	A	.	.	.	.	.	.	.	.	.	P	K	A	F	Y	Q	L	D	G	Q	T	L	I	E	R	A	V	D	G	L	L	D	S	G	V	V	D	T	V	V	V	A	V	P	A	D	R	T	D	E	A	R	Q	I	L	G	H	R	A	M	I	V	A	G	V	.	.	.	.	.	.	.	.
Template Known Secondary structure										.	.	.	.	.	.	.	.	.			T	T				T	T														T	S											S	S	S								S		S	S	S							.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.										.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																										.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	A	A	V	P	A	V	Q	T	E	H	C	F	L	T	H	G	D	M	P	T	L	T	I	D	I	F	R	K	I	W	S	L	R	N	D	G	A	I	L	P	L	H	N	G	I	P	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	L	V	S
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	A	L	T	V	L	S	E	P	E	F	V	L	V	H	D	A	A	R	A	L	T	P	P	A	L	V	A	R	V	V	E	A	L	R	D	G	Y	A	A	V	V	P	V	L	P	L	S	D	T	I	K	A	V	D	A	N	G	V	V	L	G	T	P	E	R	A	G	L	R	A	V	Q	T	P	Q	G	F	T
Template Known Secondary structure							S					S							T	T		T	T														T	T	T		S									S	S							T	T	S								S	S							S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	C	L	M	Q	A	I	Q	R	P	N	V	T	N	M	R	Q	A	L	L	M	G	D	H	Y	S	V	E	I	E	N	A	E	I	I	L	D	I	D	T	P	D	D	F	I	T	A	K	E	R	Y	T
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		T	D	L	L	L	R	S	Y	Q	Y	T	.	.	.	D	D	A	S	L	V	E	H	I	G	G	Q	V	Q	V	V	D	G	D	P	L	A	F	K	I	T	T	K	L	D	L	L	L	A	Q	A	I	V	R
Template Known Secondary structure													.	.	.		S								T										G	G	G					S												T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions